RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
RPAIN-213ENST00000573577 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
RPAIN-213ENST00000573577 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-213ENST00000573577 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-213ENST00000573577 NPFFR2Q9Y5X5 522 aa12.48□□□□□ -0.41
RPAIN-213ENST00000573577 FAM234BA2RU67 622 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 TP53I11O14683 189 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 TO15178 435 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 SOX30O94993 753 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 NADKO95544 446 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 KRT16P08779 473 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 NAGAP17050 411 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 NCF2P19878 526 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 MST1P26927 711 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 KRT20P35900 424 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 CCT3P49368 545 aaKnown RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 PRIM2P49643 509 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 POLR2JP52435 117 aaKnown RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 ARFIP2P53365 341 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 PRKAG1P54619 331 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 WNT3P56703 355 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 HBA1P69905 142 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 MSANTD1Q6ZTZ1 278 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 MDGA2Q7Z553 956 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 SLC34A3Q8N130 599 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 TRIML2Q8N7C3 387 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 CDRT4Q8N9R6 151 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 OR4A15Q8NGL6 344 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 NUDT8Q8WV74 236 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 TMEM120AQ9BXJ8 343 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 NSRP1Q9H0G5 558 aaKnown RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 Q9N2J8 555 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 SIRT3Q9NTG7 399 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 BTNL2Q9UIR0 455 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 MRTO4Q9UKD2 239 aaKnown RBP12.47□□□□□ -0.41
RPAIN-213ENST00000573577 OR10H1Q9Y4A9 318 aa12.47□□□□□ -0.41
RPAIN-213ENST00000573577 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 KLRC4-KLRK1H3BQV0 150 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 SCN2BO60939 215 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 AGFG2O95081 481 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 P04436 131 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CT45A8P0DMV1 189 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CT45A9P0DMV2 189 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 ABCD3P28288 659 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 IL12AP29459 219 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 SOAT1P35610 550 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 PSMD4P55036 377 aaKnown RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 KCNK10P57789 538 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 MRPS22P82650 360 aaKnown RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 TP53BP2Q13625 1128 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 NNATQ16517 81 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 NTRK2Q16620 822 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 ZNF791Q3KP31 576 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CYP27C1Q4G0S4 372 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CT45A2Q5DJT8 189 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 SLC22A10Q63ZE4 541 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 LYPD8Q6UX82 237 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 SLC44A2Q8IWA5 706 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CLECL1Q8IZS7 167 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 FAM13CQ8NE31 585 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CCDC115Q96NT0 180 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 LMF2Q9BU23 707 aaKnown RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 CXorf36Q9H7Y0 433 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 EQTNQ9NQ60 294 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
RPAIN-213ENST00000573577 FAF1Q9UNN5 650 aaPredicted RBP12.46□□□□□ -0.41
RPAIN-213ENST00000573577 LRRK2Q5S007 2527 aa12.46□□□□□ -0.42
RPAIN-213ENST00000573577 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 C9JVG2 144 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PEX1O43933 1283 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 SEMA7AO75326 666 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PPM1BO75688 479 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 UNC5CO95185 931 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CPSF4O95639 269 aaKnown RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 ZNF24P17028 368 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 UQCRC2P22695 453 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 IL12BP29460 328 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 LSP1P33241 339 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 DGKQP52824 942 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CORO7P57737 925 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PHC1P78364 1004 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 PSG6Q00889 435 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 ALDH6A1Q02252 535 aaKnown RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 DECR1Q16698 335 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 MFSD12Q6NUT3 480 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 SULF2Q8IWU5 870 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 CPSF7Q8N684 471 aaKnown RBP12.45□□□□□ -0.42
RPAIN-213ENST00000573577 POGLUT1Q8NBL1 392 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
RPAIN-213ENST00000573577 SLC9A6Q92581 669 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms