RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 SUSD5O60279 629 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 OR10H2O60403 315 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 LRATO95237 230 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 P04436 131 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 COX7A2P14406 83 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 DDX5P17844 614 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 DDCP20711 480 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 DNAJA1P31689 397 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 MAN2A2P49641 1150 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 SLC10A1Q14973 349 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 MPEG1Q2M385 716 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 FAM71E1Q6IPT2 247 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 SLC48A1Q6P1K1 146 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 MAVSQ7Z434 540 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 SPATA19Q7Z5L4 167 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 LIX1LQ8IVB5 337 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 MMP21Q8N119 569 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 ACTRT2Q8TDY3 377 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 EXOSC8Q96B26 276 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 RBM18Q96H35 190 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 EGLN2Q96KS0 407 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 DGAT2Q96PD7 388 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 PELOQ9BRX2 385 aaKnown RBP13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 SLC24A3Q9HC58 644 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 TCF7L2Q9NQB0 619 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 COPS7AQ9UBW8 275 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 Q9UFV3 132 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 UTS2RQ9UKP6 389 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 ACAD8Q9UKU7 415 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 ITPR3Q14573 2671 aa13.61□□□□□ -0.23
NPLOC4-207ENST00000572346 NCKAP5O14513 1909 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 ARHGAP21Q5T5U3 1957 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 A0A0G2JND7 137 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 DYRK3O43781 588 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 WDR1O75083 606 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 G6PDP11413 515 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 ALOX15P16050 662 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 HPCAL1P37235 193 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 PIGAP37287 484 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 RPL3P39023 403 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 ADH7P40394 386 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 IDH3AP50213 366 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 XKP51811 444 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 DLX5P56178 289 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 GNGT1P63211 74 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 IGLV3-21P80748 117 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 PLIN5Q00G26 463 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 AKAP6Q13023 2319 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 PTGR1Q14914 329 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 PIGGQ5H8A4 983 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 WLSQ5T9L3 541 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 C6orf163Q5TEZ5 329 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 OGFOD2Q6N063 350 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 R3HCC1LQ7Z5L2 792 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 NUBPLQ8TB37 319 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 CHMP6Q96FZ7 201 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 SENP5Q96HI0 755 aaPredicted RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 RILPQ96NA2 401 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 OR52B2Q96RD2 323 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 CNPPD1Q9BV87 410 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 DPY30Q9C005 99 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 REEP4Q9H6H4 257 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 LDAHQ9H6V9 325 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 ASIC5Q9NY37 505 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 EHD3Q9NZN3 535 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 SH3BP4Q9P0V3 963 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 MAPRE3Q9UPY8 281 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
NPLOC4-207ENST00000572346 TRGV5A0A0B4J1U4 118 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 UBDO15205 165 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 HCN1O60741 890 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PORP16435 677 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PCSK2P16519 638 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 ENDOUP21128 410 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 FEN1P39748 380 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 STT3AP46977 705 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 IST1P53990 364 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 DIO3P55073 304 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 SF3A3Q12874 501 aaKnown RBP eCLIP13.59□□□□□ -0.232e-8■■■■□ 20.1
NPLOC4-207ENST00000572346 ZNF791Q3KP31 576 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 LSM12Q3MHD2 195 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 C1orf185Q5T7R7 199 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 SLC22A10Q63ZE4 541 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 LYPD8Q6UX82 237 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 C9orf40Q8IXQ3 194 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 SAMD14Q8IZD0 417 aaPredicted RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 RFWD2Q8NHY2 731 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PPCDCQ96CD2 204 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 BBS4Q96RK4 519 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PRPF18Q99633 342 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 EBF4Q9BQW3 602 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 NSRP1Q9H0G5 558 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms