RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 MIEF1Q9NQG6 463 aa12.54□□□□□ -0.4
RAB40B-204ENST00000571554 RYDENQ9NUL5 291 aaKnown RBP12.54□□□□□ -0.4
RAB40B-204ENST00000571554 EXO1Q9UQ84 846 aaKnown RBP12.54□□□□□ -0.4
RAB40B-204ENST00000571554 SERTM1A2A2V5 107 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 MYO1GB0I1T2 1018 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 TO15178 435 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 UROSP10746 265 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 TACR1P25103 407 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 IL12BP29460 328 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 MPIP34949 423 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 KRT20P35900 424 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 VSNL1P62760 191 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 SRYQ05066 204 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 LIPMQ5VYY2 423 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 VASNQ6EMK4 673 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 NOXRED1Q6NXP6 359 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 LARP4Q71RC2 724 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 EIF1ADQ8N9N8 165 aaKnown RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 RELL2Q8NC24 303 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 OR14L1PQ8NHC6 308 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 ABTB1Q969K4 478 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 WDYHV1Q96HA8 205 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 GATA5Q9BWX5 397 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 GLIPR2Q9H4G4 154 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 MYNNQ9NPC7 610 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
RAB40B-204ENST00000571554 FBXL2Q9UKC9 423 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 OR10H1Q9Y4A9 318 aa12.53□□□□□ -0.4
RAB40B-204ENST00000571554 OR6C70A6NIJ9 312 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 AHRRA9YTQ3 701 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 TMEM233B4DJY2 109 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SCO2O43819 266 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 TSPAN2O60636 221 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CDH16O75309 829 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SPAG7O75391 227 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SEC22BO75396 215 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 BCAS2O75934 225 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-204ENST00000571554 RSL1D1O76021 490 aaKnown RBP12.52□□□□□ -0.41
RAB40B-204ENST00000571554 EPPINO95925 133 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CHRNGP07510 517 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 NTSP30990 170 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 UQCRC1P31930 480 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 RFX3P48380 749 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SLC18A2Q05940 514 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CEBPEQ15744 281 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CDH24Q86UP0 819 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SAMD14Q8IZD0 417 aaPredicted RBP12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CLYBLQ8N0X4 340 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 OR2T11Q8NH01 316 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CLHC1Q8NHS4 586 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.41
RAB40B-204ENST00000571554 NRGNQ92686 78 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 TMCO6Q96DC7 493 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SLC35A4Q96G79 324 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 MECRQ9BV79 373 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 PRDM14Q9GZV8 571 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SIRT5Q9NXA8 310 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 TAS2R9Q9NYW1 312 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 FLRT3Q9NZU0 649 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 SLC17A7Q9P2U7 560 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CCL27Q9Y4X3 112 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 WIF1Q9Y5W5 379 aa12.52□□□□□ -0.41
RAB40B-204ENST00000571554 ANKRD17O75179 2603 aaKnown RBP12.52□□□□□ -0.41
RAB40B-204ENST00000571554 CCDC168Q8NDH2 2452 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
RAB40B-204ENST00000571554 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 B4DXG7 233 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 FAM47E-STBD1D6RA91 191 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 AZIN1O14977 448 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 AKAP10O43572 662 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 PLOD3O60568 738 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 LINC00032P0C843 101 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 CYP4B1P13584 511 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 STARP49675 285 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 ZNF136P52737 540 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 PSG6Q00889 435 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 HSPB3Q12988 150 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 STX5Q13190 355 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 SNTA1Q13424 505 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 HSPB2Q16082 182 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 SLC25A35Q3KQZ1 300 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 ZNF551Q7Z340 670 aaPredicted RBP12.51□□□□□ -0.41
RAB40B-204ENST00000571554 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 LACC1Q8IV20 430 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 ZZZ3Q8IYH5 903 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 PM20D2Q8IYS1 436 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 AGR3Q8TD06 166 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 CIDECQ96AQ7 238 aaPredicted RBP12.51□□□□□ -0.41
RAB40B-204ENST00000571554 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 APOPT1Q96IL0 206 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 AMDHD1Q96NU7 426 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 TSSK3Q96PN8 268 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 FAM111AQ96PZ2 611 aa12.51□□□□□ -0.41
RAB40B-204ENST00000571554 IQCGQ9H095 443 aaKnown RBP12.51□□□□□ -0.41
RAB40B-204ENST00000571554 TUBB1Q9H4B7 451 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms