RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 NAP1L3Q99457 506 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 KLF6Q99612 283 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 APOOQ9BUR5 198 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TDRD1Q9BXT4 1180 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 ABCG4Q9H172 646 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 CARD9Q9H257 536 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GOLPH3Q9H4A6 298 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TRABDQ9H4I3 376 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 LZTFL1Q9NQ48 299 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 PHPT1Q9NRX4 125 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 KRT84Q9NSB2 600 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 ADPRHL2Q9NX46 363 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 NLGN3Q9NZ94 848 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 PKD2L2Q9NZM6 624 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 HACD3Q9P035 362 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 KLHL8Q9P2G9 620 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 FBXL17Q9UF56 701 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 FAM153AQ9UHL3 310 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 RSPH14Q9UHP6 348 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 ANGPTL2Q9UKU9 493 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TFR2Q9UP52 801 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 EXO1Q9UQ84 846 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 CHKBQ9Y259 395 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 ITM2BQ9Y287 266 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 JRKLQ9Y4A0 524 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 PCDHGA1Q9Y5H4 931 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 RALGAPA1Q6GYQ0 2036 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 SPAG17Q6Q759 2223 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 EML5Q05BV3 1969 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 GPR179Q6PRD1 2367 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SPAARA0A1B0GVQ0 90 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 C2orf81A6NN90 581 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 LMO7DNF2Z398 122 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 AP3B1O00203 1094 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 RAD51BO15315 384 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PSMD3O43242 534 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 AQP9O43315 295 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 KIF5CO60282 957 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SDC3O75056 442 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PCCBP05166 539 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 GP1BAP07359 652 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PRSS56P0CW18 603 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 RNF224P0DH78 156 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 HLA-DPA1P20036 260 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PTPN3P26045 913 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 HMGCLP35914 325 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 TRIM23P36406 574 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 MARCKSL1P49006 195 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 VEGFCP49767 419 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 KIAA1024LP59773 190 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 CD81P60033 236 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 GNB1P62873 340 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 IL9RQ01113 521 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PMP22Q01453 160 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 OTUD4Q01804 1114 aaKnown RBP3.63□□□□□ -1.83
NUP88-202ENST00000570937 SEMG2Q02383 582 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 RALGDSQ12967 914 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 AIMP2Q13155 320 aaKnown RBP3.63□□□□□ -1.83
NUP88-202ENST00000570937 FZD2Q14332 565 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 FCN2Q15485 313 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PARP6Q2NL67 630 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 WSCD2Q2TBF2 565 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ZNF542PQ5EBM4 170 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ANKRD20A2Q5SQ80 823 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ANKRD20A1Q5TYW2 823 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ANKRD20A3Q5VUR7 823 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PDPK2PQ6A1A2 396 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 RAET1GQ6H3X3 334 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ENPP7Q6UWV6 458 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 HSD11B1LQ7Z5J1 315 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 LINC00523Q86TU6 105 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ZNF567Q8N184 647 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SLC22A18ASQ8N1D0 253 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SLC25A45Q8N413 288 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 CCDC89Q8N998 374 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 OR56A4Q8NGH8 313 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 OR4C6Q8NH72 309 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ACTL9Q8TC94 416 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 LMX1AQ8TE12 382 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 NAT6Q93015 286 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 DTD2Q96FN9 168 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 TTC25Q96NG3 672 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 QKIQ96PU8 341 aaKnown RBP eCLIP3.63□□□□□ -1.83
NUP88-202ENST00000570937 LYSMD1Q96S90 227 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ZSCAN5AQ9BUG6 496 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 GBA3Q9H227 469 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SEMA6AQ9H2E6 1030 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 DENND2DQ9H6A0 471 aaPredicted RBP3.63□□□□□ -1.83
NUP88-202ENST00000570937 MBNL1Q9NR56 388 aaKnown RBP3.63□□□□□ -1.83
NUP88-202ENST00000570937 APOBEC3BQ9UH17 382 aaKnown RBP3.63□□□□□ -1.83
NUP88-202ENST00000570937 MOSPD1Q9UJG1 213 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 ZNF148Q9UQR1 794 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 CA5BQ9Y2D0 317 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 PPP2R2CQ9Y2T4 447 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 NEUROG3Q9Y4Z2 214 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 OR1A2Q9Y585 309 aa3.63□□□□□ -1.83
NUP88-202ENST00000570937 SLCO1B1Q9Y6L6 691 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms