RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 SENP1Q9P0U3 644 aa18.82■□□□□ 0.6
LITAF-205ENST00000570904 SERTM1A2A2V5 107 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 CD8B2A6NJW9 211 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 SYT5O00445 386 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 TSPAN2O60636 221 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 PROCP04070 461 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 KIR2DL3P43628 341 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 SLCO1A2P46721 670 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 AGFG1P52594 562 aaKnown RBP18.81■□□□□ 0.6
LITAF-205ENST00000570904 ZNF763Q0D2J5 394 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 C2orf80Q0P641 193 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 SF3B4Q15427 424 aaKnown RBP eCLIP18.81■□□□□ 0.6
LITAF-205ENST00000570904 CEBPEQ15744 281 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 OR14L1PQ8NHC6 308 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 SLC35A4Q96G79 324 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 BBS4Q96RK4 519 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 C12orf65Q9H3J6 166 aaKnown RBP18.81■□□□□ 0.6
LITAF-205ENST00000570904 TNFRSF12AQ9NP84 129 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 ZNF629Q9UEG4 869 aaPredicted RBP18.81■□□□□ 0.6
LITAF-205ENST00000570904 POLR3HQ9Y535 204 aaPredicted RBP18.81■□□□□ 0.6
LITAF-205ENST00000570904 WIF1Q9Y5W5 379 aa18.81■□□□□ 0.6
LITAF-205ENST00000570904 MBD3L4A6NDZ8 208 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 MBD3L3A6NE82 208 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 MBD3L5A6NJ08 208 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 SMIM23A6NLE4 172 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 PLOD3O60568 738 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 CBR3O75828 277 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 ACTL6AO96019 429 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 DDCP20711 480 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 IL12BP29460 328 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 GCKP35557 465 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 ZNF155Q12901 538 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 IMPG1Q17R60 797 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 FRMD7Q6ZUT3 714 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 SH2D5Q6ZV89 423 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 LARP4Q71RC2 724 aaKnown RBP eCLIP18.8■□□□□ 0.62e-12■■■□□ 15.7
LITAF-205ENST00000570904 PLCZ1Q86YW0 608 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 SLC44A2Q8IWA5 706 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 C9orf106Q8NAJ2 232 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 OR4N2Q8NGD1 307 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 MBD3L2Q8NHZ7 208 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 RNASE6Q93091 150 aaKnown RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 EFHD2Q96C19 240 aaPredicted RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 CCDC126Q96EE4 140 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 GPATCH1Q9BRR8 931 aaKnown RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 SIRT5Q9NXA8 310 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 DNAJB12Q9NXW2 375 aaKnown RBP18.8■□□□□ 0.6
LITAF-205ENST00000570904 FBXL2Q9UKC9 423 aa18.8■□□□□ 0.6
LITAF-205ENST00000570904 C17orf51A8MQB3 221 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 PLIN3O60664 434 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 ABCB7O75027 752 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 CRCPO75575 148 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 CTAG2O75638 210 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 JUNP05412 331 aaKnown RBP18.79■□□□□ 0.6
LITAF-205ENST00000570904 CYP4B1P13584 511 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 TCEA1P23193 301 aaKnown RBP18.79■□□□□ 0.6
LITAF-205ENST00000570904 MPIP34949 423 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 KRT20P35900 424 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 MC3RP41968 323 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 GSTM5P46439 218 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 NCBP2P52298 156 aaKnown RBP eCLIP18.79■□□□□ 0.6
LITAF-205ENST00000570904 SRYQ05066 204 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 EFR3AQ14156 821 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 RCAN2Q14206 197 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 FBXL19-AS1Q494R0 122 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 OR5M10Q6IEU7 315 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 FAM71E1Q6IPT2 247 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 SPNS3Q6ZMD2 512 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 UBLCP1Q8WVY7 318 aaPredicted RBP18.79■□□□□ 0.6
LITAF-205ENST00000570904 TUBA1CQ9BQE3 449 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 SHCBP1LQ9BZQ2 653 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 CALHM2Q9HA72 323 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 TAS2R10Q9NYW0 307 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 OR10H1Q9Y4A9 318 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 AKAP6Q13023 2319 aa18.79■□□□□ 0.6
LITAF-205ENST00000570904 MYO1GB0I1T2 1018 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 EEF1E1-BLOC1S5C9J1V9 151 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 H0Y3Z8 333 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 EEF1E1O43324 174 aaKnown RBP18.78■□□□□ 0.6
LITAF-205ENST00000570904 CTSSP25774 331 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 DNAJA1P31689 397 aaKnown RBP18.78■□□□□ 0.6
LITAF-205ENST00000570904 CFAP157Q5JU67 520 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 SH2D4BQ5SQS7 431 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 TMEM107Q6UX40 140 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 PLXDC2Q6UX71 529 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 IFNEQ86WN2 208 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 TRIM42Q8IWZ5 723 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 ZPLD1Q8TCW7 415 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 LRRC46Q96FV0 321 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 STMN4Q9H169 189 aaPredicted RBP18.78■□□□□ 0.6
LITAF-205ENST00000570904 MYNNQ9NPC7 610 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 MIEF1Q9NQG6 463 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 TAS2R9Q9NYW1 312 aa18.78■□□□□ 0.6
LITAF-205ENST00000570904 B4DXG7 233 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 COQ9O75208 318 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 CPN1P15169 458 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 GRK2P25098 689 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 SRD5A2P31213 254 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 PEX19P40855 299 aa18.77■□□□□ 0.6
LITAF-205ENST00000570904 STARP49675 285 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms