RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 LHX4Q969G2 390 aa2□□□□□ -2.09
UBR1-209ENST00000569243 CTRCQ99895 268 aa2□□□□□ -2.09
UBR1-209ENST00000569243 KRTAP4-1Q9BYQ7 146 aa2□□□□□ -2.09
UBR1-209ENST00000569243 IL1RAPL2Q9NP60 686 aa2□□□□□ -2.09
UBR1-209ENST00000569243 LHX3Q9UBR4 397 aa2□□□□□ -2.09
UBR1-209ENST00000569243 SLC2A6Q9UGQ3 507 aa2□□□□□ -2.09
UBR1-209ENST00000569243 TRMT6Q9UJA5 497 aaKnown RBP2□□□□□ -2.09
UBR1-209ENST00000569243 EEF2KO00418 725 aaKnown RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 CFLARO15519 480 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 RANBP6O60518 1105 aaKnown RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 RAMP1O60894 148 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 CA11O75493 328 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 UGT1A6P19224 532 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 UGT1A3P35503 534 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 KRT83P78385 493 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 BNIP1Q12981 228 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 CAMK4Q16566 473 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 DCAF4L1Q3SXM0 396 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 GLRA4Q5JXX5 417 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 SPATA46Q5T0L3 261 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 DCST2Q5T1A1 773 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 MEDAGQ5VYS4 303 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 PRR5LQ6MZQ0 368 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 KCTD9Q7L273 389 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 PRSS48Q7RTY5 328 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 TSEN54Q7Z6J9 526 aaKnown RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 PYROXD2Q8N2H3 581 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 GDAP1Q8TB36 358 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 SRSF12Q8WXF0 261 aaKnown RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 SLC35E1Q96K37 410 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 RTBDNQ9BSG5 229 aaPredicted RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 SLC25A39Q9BZJ4 359 aaPredicted RBP1.99□□□□□ -2.09
UBR1-209ENST00000569243 TRPV6Q9H1D0 765 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 TMEM245Q9H330 911 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 Q9H3A6 140 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 ALG9Q9H6U8 611 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 TRPC4Q9UBN4 977 aa1.99□□□□□ -2.09
UBR1-209ENST00000569243 ZNF320A2RRD8 509 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 LRIT2A6NDA9 550 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 OR7A17O14581 309 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 FOXH1O75593 365 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 TOXO94900 526 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 GSTA1P08263 222 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 FERP16591 822 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 STK19P49842 368 aaPredicted RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 CCZ1BP86790 482 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 CCZ1P86791 482 aaPredicted RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 ROR1Q01973 937 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 OC90Q02509 493 aaPredicted RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 ORC2Q13416 577 aaPredicted RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 EBI3Q14213 229 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 EIF2B1Q14232 305 aaKnown RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 ZNF528Q3MIS6 628 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 EOGTQ5NDL2 527 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 UFSP1Q6NVU6 142 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 ERI1Q8IV48 349 aaKnown RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 BBS1Q8NFJ9 593 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 OR4A16Q8NH70 328 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 SLC25A38Q96DW6 304 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 TSPAN18Q96SJ8 248 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 FUT8Q9BYC5 575 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 OSBPL8Q9BZF1 889 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 TNMDQ9H2S6 317 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 ZCCHC3Q9NUD5 404 aaKnown RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 EHFQ9NZC4 300 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 MBD2Q9UBB5 411 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 BARX2Q9UMQ3 279 aaPredicted RBP1.98□□□□□ -2.09
UBR1-209ENST00000569243 ENTPD4Q9Y227 616 aa1.98□□□□□ -2.09
UBR1-209ENST00000569243 LYPLA1O75608 230 aaPredicted RBP1.97□□□□□ -2.09
UBR1-209ENST00000569243 SEMG1P04279 462 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 SDC1P18827 310 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 ACVR1BP36896 505 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 LINC00315P59091 139 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 IL9RQ01113 521 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 PUDPQ08623 228 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 NPRL3Q12980 569 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 IL18R1Q13478 541 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 IFI44LQ53G44 452 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 TICAM2Q86XR7 235 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 ADAMTS16Q8TE57 1224 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 C18orf25Q96B23 403 aaPredicted RBP1.97□□□□□ -2.09
UBR1-209ENST00000569243 DNAJA3Q96EY1 480 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 FAM213AQ9BRX8 229 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 TM2D1Q9BX74 207 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 MRPL9Q9BYD2 267 aaKnown RBP1.97□□□□□ -2.09
UBR1-209ENST00000569243 FAM124BQ9H5Z6 455 aaPredicted RBP1.97□□□□□ -2.09
UBR1-209ENST00000569243 STX8Q9UNK0 236 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 KLHDC2Q9Y2U9 406 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 ZNF175Q9Y473 711 aa1.97□□□□□ -2.09
UBR1-209ENST00000569243 LRRD1A4D1F6 860 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 ZNF263O14978 683 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 SLC7A4O43246 635 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 HTATSF1O43719 755 aaKnown RBP1.96□□□□□ -2.1
UBR1-209ENST00000569243 NME2P1O60361 137 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 GMNNO75496 209 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 PGK1P00558 417 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 STSP08842 583 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 PSG2P11465 335 aa1.96□□□□□ -2.1
UBR1-209ENST00000569243 CTNNB1P35222 781 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms