RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 KCNJ5P48544 419 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 RPP38P78345 283 aaKnown RBP13.4□□□□□ -0.26
USB1-214ENST00000568848 BIKQ13323 160 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 CUL3Q13618 768 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 NUP54Q7Z3B4 507 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 PLCZ1Q86YW0 608 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 SPATA4Q8NEY3 305 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 KAT2AQ92830 837 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 EFHD2Q96C19 240 aaPredicted RBP13.4□□□□□ -0.26
USB1-214ENST00000568848 NOL11Q9H8H0 719 aaKnown RBP13.4□□□□□ -0.26
USB1-214ENST00000568848 PCDHGA11Q9Y5H2 935 aa13.4□□□□□ -0.26
USB1-214ENST00000568848 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.39□□□□□ -0.27
USB1-214ENST00000568848 SLC22A20A6NK97 555 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 RNF212BA8MTL3 300 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PPP6CO00743 305 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 RAD51CO43502 376 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 CBR3O75828 277 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 CGAP01215 116 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PORP16435 677 aaPredicted RBP13.39□□□□□ -0.27
USB1-214ENST00000568848 GRK2P25098 689 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 SRD5A2P31213 254 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 ALDH9A1P49189 494 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 EMDP50402 254 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 CLDN20P56880 219 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 ETF1P62495 437 aaKnown RBP13.39□□□□□ -0.27
USB1-214ENST00000568848 STX5Q13190 355 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 TRADDQ15628 312 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 CCNYL2Q5T2Q4 361 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 C6orf163Q5TEZ5 329 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 LIPJQ5W064 366 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PPP4R4Q6NUP7 873 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 TBC1D1Q86TI0 1168 aaPredicted RBP13.39□□□□□ -0.27
USB1-214ENST00000568848 OR7G1Q8NGA0 311 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 IGFBPL1Q8WX77 278 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 ZFP3Q96NJ6 502 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 UCN2Q96RP3 112 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PINK1Q9BXM7 581 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 NMRAL1Q9HBL8 299 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 ZNF639Q9UID6 485 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 PCDHA9Q9Y5H5 950 aa13.39□□□□□ -0.27
USB1-214ENST00000568848 HMX2A2RU54 273 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 OPN1LWP04000 364 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 FPR1P21462 350 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 DPP4P27487 766 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 GCKP35557 465 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 GAS1P54826 345 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
USB1-214ENST00000568848 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 COMMD6Q7Z4G1 85 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
USB1-214ENST00000568848 PLD6Q8N2A8 252 aaKnown RBP13.38□□□□□ -0.27
USB1-214ENST00000568848 FBF1Q8TES7 1133 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 NEUROG1Q92886 237 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 CNRIP1Q96F85 164 aaPredicted RBP13.38□□□□□ -0.27
USB1-214ENST00000568848 COL21A1Q96P44 957 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 ERP44Q9BS26 406 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 GSX2Q9BZM3 304 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 DSN1Q9H410 356 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 MED11Q9P086 117 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 DLGAP4Q9Y2H0 992 aa13.38□□□□□ -0.27
USB1-214ENST00000568848 FAM187AA6NFU0 413 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 H3BML4 177 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 KLF4O43474 513 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 TSPAN2O60636 221 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 AQP8O94778 261 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 NTN1O95631 604 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 C2P06681 752 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 RHOXF2BP0C7M4 288 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 SPRP35270 261 aaPredicted RBP13.37□□□□□ -0.27
USB1-214ENST00000568848 SLC6A8P48029 635 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 MAPK12P53778 367 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 ATP5J2P56134 94 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 PHEXP78562 749 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
USB1-214ENST00000568848 GALNT1Q10472 559 aaPredicted RBP13.37□□□□□ -0.27
USB1-214ENST00000568848 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 GAB1Q13480 694 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 MROH9Q5TGP6 573 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 RAET1LQ5VY80 246 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 HMBOX1Q6NT76 420 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
USB1-214ENST00000568848 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 CCDC25Q86WR0 208 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 WFDC8Q8IUA0 241 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 PTGR2Q8N8N7 351 aaPredicted RBP13.37□□□□□ -0.27
USB1-214ENST00000568848 L3MBTL4Q8NA19 623 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 C17orf47Q8NEP4 570 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 OR9A2Q8NGT5 310 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 CDKL2Q92772 493 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 TM4SF18Q96CE8 201 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 PHF21BQ96EK2 531 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 GPR78Q96P69 363 aa13.37□□□□□ -0.27
USB1-214ENST00000568848 NPAS1Q99742 590 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms