RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MBD2Q9UBB5 411 aa10.31□□□□□ -0.76
PALB2-206ENST00000568219 PLEKHB1Q9UF11 243 aaPredicted RBP10.31□□□□□ -0.76
PALB2-206ENST00000568219 TAC3Q9UHF0 121 aa10.31□□□□□ -0.76
PALB2-206ENST00000568219 FEZF1A0PJY2 475 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 H7BY64 318 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 FLRT2O43155 660 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TRIM3O75382 744 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 MSL3P1P0C860 447 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CBSLP0DN79 551 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CBSP35520 551 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SLC1A3P43003 542 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CLDN20P56880 219 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 OR10A3P58181 314 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TBPL1P62380 186 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 C19orf57Q0VDD7 668 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ILKQ13418 452 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 AFMIDQ63HM1 303 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 DEFB128Q7Z7B8 93 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF454Q8N9F8 522 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 FBXO15Q8NCQ5 510 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 OR4C6Q8NH72 309 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TMEM163Q8TC26 289 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ASB11Q8WXH4 323 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 PRAP1Q96NZ9 151 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 MACROD1Q9BQ69 325 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF416Q9BWM5 594 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF436Q9C0F3 470 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 SLITRK2Q9H156 845 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TREM1Q9NP99 234 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SPG21Q9NZD8 308 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 FBXL2Q9UKC9 423 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CCL27Q9Y4X3 112 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 EP400Q96L91 3159 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZC3H12DA2A288 527 aaKnown RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 NEDD8-MDP1E9PL57 170 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SIGLEC5O15389 551 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF821O75541 412 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 WISP3O95389 354 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 KLKB1P03952 638 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CKBP12277 381 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 LAMP2P13473 410 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 GSTM3P21266 225 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 UQCRC2P22695 453 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 GABRA5P31644 462 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ADH7P40394 386 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SIGLEC14Q08ET2 396 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF234Q14588 700 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TAF13Q15543 124 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.3□□□□□ -0.762e-6■□□□□ 10.2
PALB2-206ENST00000568219 MTSS1LQ765P7 747 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 PRSS42Q7Z5A4 293 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 NRMQ8IXM6 262 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 FBXO22Q8NEZ5 403 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ARSGQ96EG1 525 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TMEM169Q96HH4 297 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SAMD8Q96LT4 415 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.3□□□□□ -0.76
PALB2-206ENST00000568219 AKAP7Q9P0M2 348 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 STOX2Q9P2F5 926 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 IKZF2Q9UKS7 526 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 IRAK3Q9Y616 596 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 MBLAC1A4D2B0 266 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 MYADML2A6NDP7 307 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 MEIS3P1A6NDR6 274 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 RASGRP1O95267 797 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 GABRB1P18505 474 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 MMP11P24347 488 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 ELAVL4P26378 380 aaKnown RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 PDHA2P29803 388 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 GRPRP30550 384 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 XCR1P46094 333 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 EPHB3P54753 998 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
PALB2-206ENST00000568219 FXNQ16595 210 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 RAB12Q6IQ22 244 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SLC24A5Q71RS6 500 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 LSRQ86X29 649 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 MS4A15Q8N5U1 240 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 RAD9AQ99638 391 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 TMEM175Q9BSA9 504 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 SMG9Q9H0W8 520 aaKnown RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 B3GAT2Q9NPZ5 323 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 CUEDC1Q9NWM3 386 aaPredicted RBP10.3□□□□□ -0.76
PALB2-206ENST00000568219 HCSTQ9UBK5 93 aa10.3□□□□□ -0.76
PALB2-206ENST00000568219 COL24A1Q17RW2 1714 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 RIIAD1A6NNX1 92 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 CHP2O43745 196 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 ACADMP11310 421 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 GABRR2P28476 465 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 AP3S2P59780 193 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 UBE2MP61081 183 aaKnown RBP10.29□□□□□ -0.76
PALB2-206ENST00000568219 SCRN3Q0VDG4 424 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 PIP5KL1Q5T9C9 394 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 FAAP20Q6NZ36 180 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 MSANTD1Q6ZTZ1 278 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 GRHL3Q8TE85 626 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 ECHDC3Q96DC8 303 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 MCHR1Q99705 422 aa10.29□□□□□ -0.76
PALB2-206ENST00000568219 EFCAB11Q9BUY7 163 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms