RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 TMEM198Q66K66 360 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 TIGD3Q6B0B8 471 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 ZCCHC12Q6PEW1 402 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 TMEM64Q6YI46 380 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 R3HCC1LQ7Z5L2 792 aaKnown RBP7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 EID3Q8N140 333 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 MARVELD2Q8N4S9 558 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 FAM13CQ8NE31 585 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 NEIL3Q8TAT5 605 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 RAB3IL1Q8TBN0 382 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 FAM110BQ8TC76 370 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 DIO2Q92813 273 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 GIMAP5Q96F15 307 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 ZBED6CLQ96FA7 236 aaPredicted RBP7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 MAGED4Q96JG8 741 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 COL21A1Q96P44 957 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 NODALQ96S42 347 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 DOHHQ9BU89 302 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 DEFB127Q9H1M4 99 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 TP63Q9H3D4 680 aaPredicted RBP7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 ANKRA2Q9H9E1 313 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 MIEF1Q9NQG6 463 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 PFDN4Q9NQP4 134 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 GIN1Q9NXP7 522 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 SUCOQ9UBS9 1254 aaKnown RBP7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 BAIAP2L1Q9UHR4 511 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 ITPR2Q14571 2701 aa7.49□□□□□ -1.21
HDGFL3-205ENST00000568129 FAM166BA8MTA8 275 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SNPHO15079 494 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SCAMP2O15127 329 aaKnown RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PDPK1O15530 556 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNHIT1O43257 154 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 FADS1O60427 444 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ERLIN1O75477 346 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PDE9AO76083 593 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SOX30O94993 753 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 NKX2-2O95096 273 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CELA3AP09093 270 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MYZAPP0CAP1 466 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ABOP16442 354 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 DDX5P17844 614 aaKnown RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PRPS1L1P21108 318 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MAPK1P28482 360 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 NTSP30990 170 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 RPL3P39023 403 aaKnown RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MC3RP41968 323 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CDK9P50750 372 aaKnown RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CLDN8P56748 225 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CORO7P57737 925 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 RPL38P63173 70 aaKnown RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 KCNJ2P63252 427 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PLGLB1Q02325 96 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MAD2L1Q13257 205 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 GAB1Q13480 694 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 EFR3AQ14156 821 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNF630Q2M218 657 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ATP6AP1LQ52LC2 224 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PRAMEF20Q5VT98 475 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 DESI1Q6ICB0 168 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 RTL6Q6ICC9 239 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 TMEM211Q6ICI0 200 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 LARP4Q71RC2 724 aaKnown RBP eCLIP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNF551Q7Z340 670 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 PACS2Q86VP3 889 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 DDIASQ8IXT1 998 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNF781Q8N8C0 355 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 WDSUB1Q8N9V3 476 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 OR4N2Q8NGD1 307 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CEP70Q8NHQ1 597 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 TMBIM1Q969X1 311 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 CIDECQ96AQ7 238 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SARAFQ96BY9 339 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 TMCO6Q96DC7 493 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNF597Q96LX8 424 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 RILPQ96NA2 401 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 TSSK3Q96PN8 268 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 TREX2Q9BQ50 279 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 ZNF395Q9H8N7 513 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 AKTIPQ9H8T0 292 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MEAF6Q9HAF1 191 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SIRT3Q9NTG7 399 aaPredicted RBP7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 SPRR3Q9UBC9 169 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 MAPRE3Q9UPY8 281 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 C15orf41Q9Y2V0 281 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 LIPGQ9Y5X9 500 aa7.48□□□□□ -1.21
HDGFL3-205ENST00000568129 UNC79Q9P2D8 2635 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 IGLV3-32A0A0A0MS00 114 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 TRGV5A0A0B4J1U4 118 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 ATP6AP2A0A1C7CYW4 349 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 TMEM120BA0PK00 339 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 WDR91A4D1P6 747 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 AHRRA9YTQ3 701 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 B4DXG7 233 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 KLF11O14901 512 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 ANKRD28O15084 1053 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 SCN2BO60939 215 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 WDR1O75083 606 aa7.47□□□□□ -1.21
HDGFL3-205ENST00000568129 PEX11AO75192 247 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms