RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	CCL27	Q9Y4X3	112 aa		6.33	□□□□□ -1.4
SF3B3-209	ENST00000567635	PCDHGB3	Q9Y5G1	929 aa		6.33	□□□□□ -1.4
SF3B3-209	ENST00000567635	DCHS2	Q6V1P9	2916 aa		6.33	□□□□□ -1.4
SF3B3-209	ENST00000567635	HEATR5A	Q86XA9	2040 aa		6.33	□□□□□ -1.4
SF3B3-209	ENST00000567635		A0A087WV62	115 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	C15orf38-AP3S2	A0A0A6YYH1	394 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	NKX2-6	A6NCS4	301 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR6C70	A6NIJ9	312 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM47E-STBD1	D6RA91	191 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	UGT2B11	O75310	529 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ERN1	O75460	977 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CBR3	O75828	277 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	RSL1D1	O76021	490 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TOX	O94900	526 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	EPPIN	O95925	133 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	JUN	P05412	331 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	HPN	P05981	417 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	FGF4	P08620	206 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	LINC00032	P0C843	101 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CT45A8	P0DMV1	189 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CT45A9	P0DMV2	189 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ENDOU	P21128	410 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	PRPH2	P23942	346 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ELAVL4	P26378	380 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ALDH3A1	P30838	453 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	SSTR2	P30874	369 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	KRT20	P35900	424 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZFP36L2	P47974	494 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	NCBP2	P52298	156 aa	Known RBP eCLIP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CORO7	P57737	925 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	PSPH	P78330	225 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	MRPS22	P82650	360 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	EFR3A	Q14156	821 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	PCLAF	Q15004	111 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	KIAA0040	Q15053	153 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	SF3B4	Q15427	424 aa	Known RBP eCLIP	6.32	□□□□□ -1.4	2e-7	■■■■■ 27.1
SF3B3-209	ENST00000567635	PRSS53	Q2L4Q9	553 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CT45A2	Q5DJT8	189 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	C1orf185	Q5T7R7	199 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	VASN	Q6EMK4	673 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	DESI1	Q6ICB0	168 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	EMB	Q6PCB8	327 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ANGPTL8	Q6UXH0	198 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	MEX3B	Q6ZN04	569 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	IKBIP	Q70UQ0	350 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	LARP4	Q71RC2	724 aa	Known RBP eCLIP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	GDF7	Q7Z4P5	450 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	LURAP1L	Q8IV03	231 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLC44A2	Q8IWA5	706 aa	Predicted RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ZNF295-AS1	Q8N0V1	137 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ACBD4	Q8NC06	268 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR7G2	Q8NG99	324 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	OR9A2	Q8NGT5	310 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	AEN	Q8WTP8	325 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	CAVIN3	Q969G5	261 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TMCO6	Q96DC7	493 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	APOPT1	Q96IL0	206 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	VSTM2L	Q96N03	204 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM111A	Q96PZ2	611 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	BTBD9	Q96Q07	612 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	NODAL	Q96S42	347 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ADO	Q96SZ5	270 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TIMP4	Q99727	224 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TRIM8	Q9BZR9	551 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ENKD1	Q9H0I2	346 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	UBQLN3	Q9H347	655 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	FOLH1B	Q9HBA9	442 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	LRTM1	Q9HBL6	345 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	EML4	Q9HC35	981 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	SENP1	Q9P0U3	644 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLC17A7	Q9P2U7	560 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	LGALS13	Q9UHV8	139 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	C19orf53	Q9UNZ5	99 aa	Predicted RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	EXO1	Q9UQ84	846 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	C15orf41	Q9Y2V0	281 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TRAF6	Q9Y4K3	522 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	POLR3H	Q9Y535	204 aa	Predicted RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	FAM215A	Q9Y5M1	114 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	ANKHD1	Q8IWZ3	2542 aa	Known RBP	6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635	TACC2	O95359	2948 aa		6.32	□□□□□ -1.4
SF3B3-209	ENST00000567635		A0A0G2JNJ9	132 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PRAMEF25	A6NGN4	478 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	ENO4	A6NNW6	628 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	HSPB2	A8KAH6	182 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NPIPB8	E9PQR5	432 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	UPK1A	O00322	258 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PLOD2	O00469	737 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	GNB5	O14775	395 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NPHS1	O60500	1241 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TSPAN2	O60636	221 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	COQ9	O75208	318 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	SPAG7	O75391	227 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NME6	O75414	186 aa	Predicted RBP	6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	SLITRK5	O94991	958 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NEFH	P12036	1026 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	BMP7	P18075	431 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	TACR1	P25103	407 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	PTPN6	P29350	595 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	IL12B	P29460	328 aa		6.31	□□□□□ -1.4
SF3B3-209	ENST00000567635	NTS	P30990	170 aa		6.31	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms