RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 COQ10BQ9H8M1 238 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 SEC14L3Q9UDX4 400 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 B3GALT1Q9Y5Z6 326 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 AGR2O95994 175 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 GABRA3P34903 492 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 HPCAP84074 193 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 PPP1R8Q12972 351 aaKnown RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 ELAVL1Q15717 326 aaKnown RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 ARHGAP11BQ3KRB8 267 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 IQCCQ4KMZ1 466 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 DCST2Q5T1A1 773 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 FAM199XQ6PEV8 388 aaPredicted RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 RAB11FIP2Q7L804 512 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 TSEN54Q7Z6J9 526 aaKnown RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 COMTD1Q86VU5 262 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 GALNT4Q8N4A0 578 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 HOXB13Q92826 284 aaPredicted RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 TMBIM1Q969X1 311 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 STACQ99469 402 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 ZNF184Q99676 751 aaPredicted RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 SLC29A1Q99808 456 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 LMF2Q9BU23 707 aaKnown RBP16.45■□□□□ 0.22
HERC2-208ENST00000566635 DUSP22Q9NRW4 184 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 C14orf105Q9NVL8 296 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 FBXO34Q9NWN3 711 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 VNN3Q9NY84 501 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 DNAJB9Q9UBS3 223 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 C15orf41Q9Y2V0 281 aa16.45■□□□□ 0.22
HERC2-208ENST00000566635 A0A0G2JPF8 293 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 HNRNPCL2B2RXH8 293 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 IDSB3KWA1 339 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 HNRNPCL3B7ZW38 293 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 SOCS2O14508 198 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PEX1O43933 1283 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PRSS23O95084 383 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 MT-CO3P00414 261 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 HNRNPCL4P0DMR1 293 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PSG6Q00889 435 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 NNATQ16517 81 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 HES3Q5TGS1 186 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 FIGNL1Q6PIW4 674 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 NPSR1Q6W5P4 371 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 SLCO6A1Q86UG4 719 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 KRT73Q86Y46 540 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 DNAJC9Q8WXX5 260 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 ZG16BQ96DA0 208 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 SENP5Q96HI0 755 aaPredicted RBP16.44■□□□□ 0.22
HERC2-208ENST00000566635 FBXL20Q96IG2 436 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 ZNF578Q96N58 590 aaPredicted RBP16.44■□□□□ 0.22
HERC2-208ENST00000566635 SPSB2Q99619 263 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 BDH2Q9BUT1 245 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 BTBD2Q9BX70 525 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 ITPAQ9BY32 194 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 OR8D2Q9GZM6 311 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PISDQ9UG56 409 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 MKLN1Q9UL63 735 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 SH3GLB1Q9Y371 365 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 PCDHGA1Q9Y5H4 931 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 CLCA3PQ9Y6N3 262 aa16.44■□□□□ 0.22
HERC2-208ENST00000566635 IGHV3-20A0A0C4DH32 117 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 A0A1W2PNU3 283 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 VSTM2BA6NLU5 285 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 NKX2-2O95096 273 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 DDAH2O95865 285 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 FESP07332 822 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 HEXBP07686 556 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 ETS2P15036 469 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 ZNF23P17027 643 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 NRF1Q16656 503 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 FAM69BQ5VUD6 431 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PRAMEF8Q5VWM4 474 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PRAMEF7Q5VXH5 474 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 TYW3Q6IPR3 259 aaKnown RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 CHDHQ8NE62 594 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 OR4N2Q8NGD1 307 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 SLC2A12Q8TD20 617 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 APOBEC4Q8WW27 367 aaKnown RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 GEMIN6Q8WXD5 167 aaKnown RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 SDF2Q99470 211 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 CALML5Q9NZT1 146 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PADI2Q9Y2J8 665 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 ACOX3O15254 700 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PRKNO60260 465 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 SERPINB7O75635 380 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 ZNF26P17031 533 aaPredicted RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 HOXB6P17509 224 aaKnown RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 AGXTP21549 392 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 KCNJ5P48544 419 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 PUM1Q14671 1186 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERC2-208ENST00000566635 MRPL14Q6P1L8 145 aaKnown RBP16.43■□□□□ 0.22
HERC2-208ENST00000566635 CBR4Q8N4T8 237 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 GALNT6Q8NCL4 622 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 CATSPER1Q8NEC5 780 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 MR1Q95460 341 aa16.43■□□□□ 0.22
HERC2-208ENST00000566635 RMND5BQ96G75 393 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms