RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C3AR1Q16581 482 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CALCRLQ16602 461 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ZSWIM7Q19AV6 140 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PRTGQ2VWP7 1150 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF699Q32M78 642 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PDSS1Q5T2R2 415 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LIN9Q5TKA1 542 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 IRAK1BP1Q5VVH5 260 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LIPNQ5VXI9 398 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PDPK2PQ6A1A2 396 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 OR4F3Q6IEY1 312 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TCEAL6Q6IPX3 200 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM53Q6P2H8 277 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ERICH5Q6P6B1 374 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PCSK4Q6UW60 755 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 HSDL2Q6YN16 418 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF730Q6ZMV8 503 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM219Q86XT9 240 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF843Q8N446 348 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TEX26Q8N6G2 289 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CSGALNACT2Q8N6G5 542 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CEP112Q8N8E3 955 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC37A3Q8NCC5 494 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 NFAM1Q8NET5 270 aaPredicted RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 OR4D5Q8NGN0 318 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ASZ1Q8WWH4 475 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM3CQ92520 227 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LHX4Q969G2 390 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 C10orf35Q96D05 121 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 URB1-AS1Q96HZ7 61 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PRRC1Q96M27 445 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 DUX5Q96PT3 197 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CCT8L2Q96SF2 557 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PSD2Q9BQI7 771 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC25A33Q9BSK2 321 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 DPH7Q9BTV6 452 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ST6GALNAC5Q9BVH7 336 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SPATA16Q9BXB7 569 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TEKT3Q9BXF9 490 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 MRPL37Q9BZE1 423 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SHARPINQ9H0F6 387 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 NXF5Q9H1B4 397 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 EGLN3Q9H6Z9 239 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 VIPAS39Q9H9C1 493 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SDR39U1Q9NRG7 319 aaPredicted RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PNO1Q9NRX1 252 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PSMC3IPQ9P2W1 217 aaPredicted RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 WNT16Q9UBV4 365 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC7A8Q9UHI5 535 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CA5BQ9Y2D0 317 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CARMIL1Q5VZK9 1371 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 GLI2P10070 1586 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ATP10DQ9P241 1426 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SMIM35A0A1B0GVV1 85 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ERICH2A1L162 156 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 OR6C74A6NCV1 312 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SERINC4A6NH21 518 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LINC01548A6NM66 108 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 C12orf71A8MTZ7 269 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 C2CD4DB7Z1M9 353 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 HSBP1L1C9JCN9 74 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF701M0R085 212 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 EPHB6O15197 1021 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 YKT6O15498 198 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 KIAA0513O60268 411 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LRCH4O75427 683 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CLPXO76031 633 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 H6PDO95479 791 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ADORA3P0DMS8 318 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 IGHV4-31P0DP07 118 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ETS2P15036 469 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ACADSP16219 412 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 PRKACAP17612 351 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GLRA1P23415 457 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ID1P41134 155 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 NDST2P52849 883 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GAS1P54826 345 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC8A3P57103 927 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 BRWD1-AS2P59051 145 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 KRTAP10-9P60411 292 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MRPS6P82932 125 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LGALS3BPQ08380 585 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF155Q12901 538 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 BNIP1Q12981 228 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GRB14Q14449 540 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 GANABQ14697 944 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 TAF13Q15543 124 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CDKN3Q16667 212 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 KNOP1Q1ED39 458 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MICBQ29980 383 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 HNRNPA1L2Q32P51 320 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ZNF829Q3KNS6 432 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 ACSF3Q4G176 576 aaPredicted RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SBK1Q52WX2 424 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 MANEAQ5SRI9 462 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 CELF3Q5SZQ8 465 aaKnown RBP2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 LCN1P1Q5VSP4 162 aa2.96□□□□□ -1.94
HERPUD1-211ENST00000566550 SLC22A10Q63ZE4 541 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms