RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
USB1-213ENST00000566292 TSPAN2O60636 221 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 ERN1O75460 977 aaKnown RBP16.67■□□□□ 0.26
USB1-213ENST00000566292 ACTL6AO96019 429 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 IL2RAP01589 272 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 KIR2DL3P43628 341 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 SF3B4Q15427 424 aaKnown RBP eCLIP16.67■□□□□ 0.26
USB1-213ENST00000566292 ERCC6LQ2NKX8 1250 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 FBXL19-AS1Q494R0 122 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 ZYG11AQ6WRX3 759 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 OR7G2Q8NG99 324 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
USB1-213ENST00000566292 RDH11Q8TC12 318 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 ADOQ96SZ5 270 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 OR2B2Q9GZK3 357 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 FOLH1BQ9HBA9 442 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 TNFRSF12AQ9NP84 129 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 GIMAP4Q9NUV9 329 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 CRIM1Q9NZV1 1036 aa16.67■□□□□ 0.26
USB1-213ENST00000566292 CCDC151A5D8V7 595 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 B4DXG7 233 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 PLOD3O60568 738 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 ABCB7O75027 752 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 GLRA3O75311 464 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 CTAG2O75638 210 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 CBR3O75828 277 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 PROCP04070 461 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 SHBGP04278 402 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 MYL2P10916 166 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 DDCP20711 480 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 DNAJA1P31689 397 aaKnown RBP16.66■□□□□ 0.26
USB1-213ENST00000566292 SLCO1A2P46721 670 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 SPDYAQ5MJ70 313 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 PLCZ1Q86YW0 608 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 FAM9CQ8IZT9 166 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 C9orf106Q8NAJ2 232 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 OR4N2Q8NGD1 307 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.66■□□□□ 0.267e-6■■■■□ 22
USB1-213ENST00000566292 ZPLD1Q8TCW7 415 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 RNF138Q8WVD3 245 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 RNASE6Q93091 150 aaKnown RBP16.66■□□□□ 0.26
USB1-213ENST00000566292 TMCO6Q96DC7 493 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 CCDC126Q96EE4 140 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 CALHM2Q9HA72 323 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 DNAJB12Q9NXW2 375 aaKnown RBP16.66■□□□□ 0.26
USB1-213ENST00000566292 FBXL2Q9UKC9 423 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 WIF1Q9Y5W5 379 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 ITPR3Q14573 2671 aa16.66■□□□□ 0.26
USB1-213ENST00000566292 C2CD3Q4AC94 2353 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 MYO1GB0I1T2 1018 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 CPN1P15169 458 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 MPIP34949 423 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 GSTM5P46439 218 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 AGFG1P52594 562 aaKnown RBP16.65■□□□□ 0.26
USB1-213ENST00000566292 GFRA1P56159 465 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 C2orf80Q0P641 193 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 FAM71E1Q6IPT2 247 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 FRMD7Q6ZUT3 714 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 LARP4Q71RC2 724 aaKnown RBP eCLIP16.65■□□□□ 0.26
USB1-213ENST00000566292 TRIM42Q8IWZ5 723 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 OR14L1PQ8NHC6 308 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 CDC26Q8NHZ8 85 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 BBS4Q96RK4 519 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 TUBA1CQ9BQE3 449 aa16.65■□□□□ 0.26
USB1-213ENST00000566292 GPATCH1Q9BRR8 931 aaKnown RBP16.65■□□□□ 0.26
USB1-213ENST00000566292 C12orf65Q9H3J6 166 aaKnown RBP16.65■□□□□ 0.26
USB1-213ENST00000566292 FAM221AA4D161 298 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 C17orf51A8MQB3 221 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 PLIN3O60664 434 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 JUNP05412 331 aaKnown RBP16.64■□□□□ 0.25
USB1-213ENST00000566292 CYP4B1P13584 511 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 CTSSP25774 331 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 IL12BP29460 328 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 PEX19P40855 299 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 PNLIPRP2P54317 469 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 GAS1P54826 345 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 PSG6Q00889 435 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 EFR3AQ14156 821 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 RCAN2Q14206 197 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 FLYWCH1Q4VC44 716 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 OR5M10Q6IEU7 315 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 PLXDC2Q6UX71 529 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 TRIM46Q7Z4K8 759 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 ADGRE4PQ86SQ3 457 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 SLC44A2Q8IWA5 706 aaPredicted RBP16.64■□□□□ 0.25
USB1-213ENST00000566292 CNPY4Q8N129 248 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 EFHD2Q96C19 240 aaPredicted RBP16.64■□□□□ 0.25
USB1-213ENST00000566292 G6PC3Q9BUM1 346 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 POLDIP3Q9BY77 421 aaKnown RBP16.64■□□□□ 0.25
USB1-213ENST00000566292 SHCBP1LQ9BZQ2 653 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 MYNNQ9NPC7 610 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 TAS2R10Q9NYW0 307 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 TAS2R9Q9NYW1 312 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 SENP1Q9P0U3 644 aa16.64■□□□□ 0.25
USB1-213ENST00000566292 POLR3HQ9Y535 204 aaPredicted RBP16.64■□□□□ 0.25
USB1-213ENST00000566292 SRD5A2P31213 254 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 GCKP35557 465 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 KRT20P35900 424 aa16.63■□□□□ 0.25
USB1-213ENST00000566292 MC3RP41968 323 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms