RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 FAM170AA1A519 330 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 CCDC162PA2VCL2 907 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TRIM64A6NGJ6 449 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 MEI4A8MW99 385 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 E9PBE3 544 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 G3V2L1 256 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 J3QR06 171 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 K7EQS6 105 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 SLC28A2O43868 658 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 AVILO75366 819 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 DAB1O75553 588 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TSPAN9O75954 239 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 AP2A1O95782 977 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 IGLV3-19P01714 112 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 HLA-DOBP13765 273 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 CDH2P19022 906 aaPredicted RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 NUDT1P36639 197 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 SLC26A3P40879 764 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TNFSF9P41273 254 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 MAGEA11P43364 429 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 AMTP48728 403 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 NUDT2P50583 147 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 ADARP55265 1226 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 SLC7A9P82251 487 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 FOXM1Q08050 763 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 BST2Q10589 180 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 PRPSAP1Q14558 356 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 IL11RAQ14626 422 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM132DQ14C87 1099 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 FAM98BQ52LJ0 330 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 COQ5Q5HYK3 327 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 SAMD4BQ5PRF9 694 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 CES4AQ5XG92 561 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 LPCAT4Q643R3 524 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 NCBP2-AS2Q69YL0 99 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 SCARA5Q6ZMJ2 495 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 CARM1Q86X55 608 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 HPS6Q86YV9 775 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 BBS5Q8N3I7 341 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 ANKFN1Q8N957 763 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TSPAN14Q8NG11 270 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 WDR20Q8TBZ3 569 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 NTAN1Q96AB6 310 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 HPDLQ96IR7 371 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF582Q96NG8 517 aaPredicted RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 CSPG4P5Q96PW8 444 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 GPR22Q99680 433 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 DDX50Q9BQ39 737 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TUBA1CQ9BQE3 449 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 MRPL1Q9BYD6 325 aaKnown RBP3.9□□□□□ -1.78
LINC00561-201ENST00000565815 WDR41Q9HAD4 459 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 ARMC1Q9NVT9 282 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 UBAP1Q9NZ09 502 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 RHCGQ9UBD6 479 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 TSPAN16Q9UKR8 245 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 STAP1Q9ULZ2 295 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 PLXNB3Q9ULL4 1909 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 ANK1P16157 1881 aa3.9□□□□□ -1.78
LINC00561-201ENST00000565815 hCG_1809904A0A1W2PP81 198 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 A0A1W2PPE2 198 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 A0A1W2PR64 198 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 SH3PXD2BA1X283 911 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 H3BNH8 94 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 ACOT8O14734 319 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 ANKRD28O15084 1053 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 KLHL41O60662 606 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 PDE5AO76074 875 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 PRAMEF12O95522 483 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 KRT19P08727 400 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 HMOX2P30519 316 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 OPRD1P41143 372 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 MRPL19P49406 292 aaKnown RBP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 CRYZQ08257 329 aaKnown RBP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 PPIDQ08752 370 aaKnown RBP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 BNIP2Q12982 314 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 GRIK2Q13002 908 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 GOLGA7BQ2TAP0 167 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 KRTCAP3Q53RY4 240 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 MDH1BQ5I0G3 518 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 CASC4Q6P4E1 433 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 ADIPOR2Q86V24 386 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 SNX32Q86XE0 403 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 CNTN4Q8IWV2 1026 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 AQP12AQ8IXF9 295 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 TMEM86AQ8N2M4 240 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 TRIML2Q8N7C3 387 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 OR14A16Q8NHC5 309 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 FNDC8Q8TC99 324 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 BORCS5Q969J3 196 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 VPS33AQ96AX1 596 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 PTERQ96BW5 349 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 NXNL1Q96CM4 212 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 RMND5BQ96G75 393 aaPredicted RBP3.9□□□□□ -1.79
LINC00561-201ENST00000565815 DOCK6Q96HP0 2047 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 ZNF479Q96JC4 524 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 SPATA17Q96L03 361 aa3.9□□□□□ -1.79
LINC00561-201ENST00000565815 LRRC3BQ96PB8 259 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms