RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZNF699Q32M78 642 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 C2orf83Q53S99 150 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 AMZ2Q86W34 360 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 PEX5LQ8IYB4 626 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 MCOLN2Q8IZK6 566 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 COLGALT1Q8NBJ5 622 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 TMEM185AQ8NFB2 350 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 PHYHIPQ92561 330 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 LINC00167Q96N53 147 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 NAP1L3Q99457 506 aaPredicted RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 KIR2DL4Q99706 377 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 TEX13AQ9BXU3 409 aaPredicted RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 CYP39A1Q9NYL5 469 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 TRMT6Q9UJA5 497 aaKnown RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 TDRKHQ9Y2W6 561 aaKnown RBP2.92□□□□□ -1.94
PALB2-203ENST00000565038 FKBP7Q9Y680 259 aa2.92□□□□□ -1.94
PALB2-203ENST00000565038 RAD54L2Q9Y4B4 1467 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 COL16A1Q07092 1604 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 IGLV8-61A0A075B6I0 122 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 KRT6AP02538 564 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 KRT6BP04259 564 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 PROS1P07225 676 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 CCDC166P0CW27 439 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 PRG2P13727 222 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 KRT6CP48668 564 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 TRPC1P48995 793 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 RPS8P62241 208 aaKnown RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 ARF5P84085 180 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 PUDPQ08623 228 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 OVGP1Q12889 678 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 GLYR1Q49A26 553 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 Q6ZVH6 145 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 GPBP1Q86WP2 473 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 CENPSQ8N2Z9 138 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 LRRC17Q8N6Y2 441 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 SPC24Q8NBT2 197 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 ZNF397Q8NF99 534 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 LINC01006Q8NI28 216 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 TSPAN18Q96SJ8 248 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 CBWD1Q9BRT8 395 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 TM2D1Q9BX74 207 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 TSSK1BQ9BXA7 367 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 DDX47Q9H0S4 455 aaKnown RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 OPN3Q9H1Y3 402 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 MEPEQ9NQ76 525 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 PRMT8Q9NR22 394 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 FAM114A2Q9NRY5 505 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 ADAM22Q9P0K1 906 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 APOBEC3BQ9UH17 382 aaKnown RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 BARX2Q9UMQ3 279 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 MTF2Q9Y483 593 aaPredicted RBP2.91□□□□□ -1.94
PALB2-203ENST00000565038 ZMYM6O95789 1325 aa2.91□□□□□ -1.94
PALB2-203ENST00000565038 CFAP65Q6ZU64 1925 aaKnown RBP2.9□□□□□ -1.95
PALB2-203ENST00000565038 STK17BO94768 372 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 PNPP00491 289 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 SDC1P18827 310 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 ELK1P19419 428 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 IGHV1-2P23083 117 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 PTBP1P26599 531 aaKnown RBP eCLIP2.9□□□□□ -1.95
PALB2-203ENST00000565038 COPB2P35606 906 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 OR3A4PP47883 348 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 SSTP61278 116 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 NME3Q13232 169 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 C2orf76Q3KRA6 126 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 DCAF4L1Q3SXM0 396 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 PAGE2BQ5JRK9 111 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 LGSNQ5TDP6 509 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 ADGRD2Q7Z7M1 963 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 ADAMTSL2Q86TH1 951 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 LEMD2Q8NC56 503 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 CCDC43Q96MW1 224 aaKnown RBP2.9□□□□□ -1.95
PALB2-203ENST00000565038 COQ7Q99807 217 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 SIRPDQ9H106 197 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 FAM124BQ9H5Z6 455 aaPredicted RBP2.9□□□□□ -1.95
PALB2-203ENST00000565038 TMEM9Q9P0T7 183 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 HMG20BQ9P0W2 317 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 PRO0461Q9UI25 63 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 CCPG1Q9ULG6 757 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 FZR1Q9UM11 496 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 CA5BQ9Y2D0 317 aa2.9□□□□□ -1.95
PALB2-203ENST00000565038 TRBV7-9A0A0J9YWB2 115 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 NPIPA2E9PIF3 369 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 BUB1O43683 1085 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 APBB3O95704 486 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 HSPB1P04792 205 aaKnown RBP2.89□□□□□ -1.95
PALB2-203ENST00000565038 ZCCHC18P0CG32 403 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 CPN1P15169 458 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 NT5C2P49902 561 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 RAB35Q15286 201 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 KRTAP13-3Q3SY46 172 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 AGKQ53H12 422 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 HERC4Q5GLZ8 1057 aaPredicted RBP2.89□□□□□ -1.95
PALB2-203ENST00000565038 MEDAGQ5VYS4 303 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 NEK11Q8NG66 645 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 OR2L5Q8NG80 312 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 SLC25A38Q96DW6 304 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 FAM122AQ96E09 287 aa2.89□□□□□ -1.95
PALB2-203ENST00000565038 CCDC51Q96ER9 411 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms