RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TNNC1P63316 161 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 HPCAP84074 193 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 GABPAQ06546 454 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 KLRC3Q07444 240 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SPAG1Q07617 926 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 BNIP1Q12981 228 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 RCN1Q15293 331 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SHHQ15465 462 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SPA17Q15506 151 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 PARP6Q2NL67 630 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 CFAP221Q4G0U5 840 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 LIN52Q52LA3 116 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SBK1Q52WX2 424 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SMUG1Q53HV7 270 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 C12orf60Q5U649 245 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 TMEM53Q6P2H8 277 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ALKBH5Q6P6C2 394 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 NHLRC1Q6VVB1 395 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 Q7L0L9 218 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ADCK1Q86TW2 530 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SLC25A42Q86VD7 318 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 LRRC49Q8IUZ0 686 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 CROCCP3Q8IVE0 287 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ST13P4Q8IZP2 240 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 LGI2Q8N0V4 545 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 FAM89BQ8N5H3 189 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 EIF1ADQ8N9N8 165 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 THAP8Q8NA92 274 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 GMCL1P1Q8NEA9 526 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 OR7A2PQ8NGA2 310 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 C11orf45Q8TAV5 145 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 PHOSPHO2Q8TCD6 241 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 DQX1Q8TE96 717 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 SDR42E1Q8WUS8 393 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 UBLCP1Q8WVY7 318 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 RAD54LQ92698 747 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 CASP10Q92851 521 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 MAGOHBQ96A72 148 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 SNRNP40Q96DI7 357 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 CHP1Q99653 195 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SELENOSQ9BQE4 189 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 RIOK1Q9BRS2 568 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 CHCHD5Q9BSY4 110 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 OSBPL10Q9BXB5 764 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SPATA16Q9BXB7 569 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 DRC3Q9H069 523 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 NAPBQ9H115 298 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 FN3KQ9H479 309 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 RNF41Q9H4P4 317 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 DCLRE1BQ9H816 532 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 Q9N2K0 584 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 DNAJC17Q9NVM6 304 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 TRIM10Q9UDY6 481 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ARMCX3Q9UH62 379 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 FAM153AQ9UHL3 310 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 SLC12A6Q9UHW9 1150 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 ITGA11Q9UKX5 1188 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 STX8Q9UNK0 236 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 PADI2Q9Y2J8 665 aa3.34□□□□□ -1.87
CHD9-212ENST00000564641 KLF2Q9Y5W3 355 aaPredicted RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.34□□□□□ -1.87
CHD9-212ENST00000564641 MYH4Q9Y623 1939 aa3.34□□□□□ -1.88
CHD9-212ENST00000564641 PIEZO1Q92508 2521 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 VCANP13611 3396 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 BAZ2AQ9UIF9 1905 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 SMIM31A0A1B0GVY4 71 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 NEMP2A6NFY4 417 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ZBTB14O43829 449 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 CNMDO75829 334 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PDE5AO76074 875 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 LCA5LO95447 670 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 GNA14O95837 355 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 OLFM2O95897 454 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PGK1P00558 417 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 HPP00738 406 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 GYPCP04921 128 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ASGR1P07306 291 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 CSN3P07498 182 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 CPA3P15088 417 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 EPCAMP16422 314 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ATP6V1E1P36543 226 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 HSD17B3P37058 310 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 TMED10P49755 219 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 DNA2P51530 1060 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 STX17P56962 302 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 POLR2LP62875 67 aaKnown RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 DLK1P80370 383 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ARF5P84085 180 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PLOD1Q02809 727 aaPredicted RBP3.33□□□□□ -1.88
CHD9-212ENST00000564641 AP1B1Q10567 949 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 HSP90AA5PQ58FG0 334 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 RESP18Q5W5W9 173 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 OLFML2AQ68BL7 652 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ENPP7Q6UWV6 458 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 C3P1Q6ZMU1 363 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 C3orf62Q6ZUJ4 267 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 ARMCX2Q7L311 632 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 PHLDB2Q86SQ0 1253 aa3.33□□□□□ -1.88
CHD9-212ENST00000564641 TMPRSS11BQ86T26 416 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms