RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 OR7G1Q8NGA0 311 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 C16orf52Q8NHV5 167 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 SLC2A12Q8TD20 617 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 ART5Q96L15 291 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 SPSB2Q99619 263 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 CRB3Q9BUF7 120 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 BTBD2Q9BX70 525 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 BCL2L10Q9HD36 194 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 SEC14L3Q9UDX4 400 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 C3orf18Q9UK00 162 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 PRDM4Q9UKN5 801 aa20.42■□□□□ 0.86
LINC01960-201ENST00000563759 A0A0G2JPF8 293 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 HNRNPCL2B2RXH8 293 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 HNRNPCL3B7ZW38 293 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 CASQ2O14958 399 aaPredicted RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 HNRNPCL4P0DMR1 293 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 GCKP35557 465 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 EXOSC6Q5RKV6 272 aaKnown RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 MRPL14Q6P1L8 145 aaKnown RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ASCL5Q7RTU5 278 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 RASSF5Q8WWW0 418 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 PIK3R3Q92569 461 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 VCX3BQ9H321 246 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 WDR54Q9H977 334 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 PRODH2Q9UF12 536 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 SATB2Q9UPW6 733 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 CNOT3O75175 753 aaKnown RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ALOX12BO75342 701 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 DEAF1O75398 565 aaPredicted RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 LDLRP01130 860 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 GABRA3P34903 492 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 EMP2P54851 167 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ATP6AP1Q15904 470 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 GRAMD1BQ3KR37 738 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ARHGAP11BQ3KRB8 267 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 DCST2Q5T1A1 773 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 TMEM164Q5U3C3 297 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 FAM198BQ6UWH4 519 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ZDHHC21Q8IVQ6 265 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ZNF615Q8N8J6 731 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 ICA1LQ8NDH6 482 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 WDR36Q8NI36 951 aaKnown RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 SPPL2AQ8TCT8 520 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 VSTM2LQ96N03 204 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 PHOX2BQ99453 314 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 LMF2Q9BU23 707 aaKnown RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 SPATA5L1Q9BVQ7 753 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 COPS7AQ9UBW8 275 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 DTX4Q9Y2E6 619 aa20.41■□□□□ 0.86
LINC01960-201ENST00000563759 GPC6Q9Y625 555 aaPredicted RBP20.41■□□□□ 0.86
LINC01960-201ENST00000563759 SOX30O94993 753 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 MFN2O95140 757 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 AK1P00568 194 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 FABP3P05413 133 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 ETS2P15036 469 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 MAP3K8P41279 467 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 POU6F2P78424 691 aaPredicted RBP20.4■□□□□ 0.86
LINC01960-201ENST00000563759 IFI44LQ53G44 452 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 HOXB13Q92826 284 aaPredicted RBP20.4■□□□□ 0.86
LINC01960-201ENST00000563759 SLC38A1Q9H2H9 487 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 BAG5Q9UL15 447 aa20.4■□□□□ 0.86
LINC01960-201ENST00000563759 NKX2-2O95096 273 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 DDAH2O95865 285 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 CST1P01037 141 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 CLPSP04118 112 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 SEMG1P04279 462 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 SLC37A1P57057 533 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 KCNJ10P78508 379 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 PSG6Q00889 435 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 SFT2D3Q587I9 215 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 CCNJQ5T5M9 372 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 ANKRD37Q7Z713 158 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 EME1Q96AY2 570 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 CENPNQ96H22 339 aaPredicted RBP20.39■□□□□ 0.86
LINC01960-201ENST00000563759 VPS50Q96JG6 964 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 ITPAQ9BY32 194 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 IL1RAPQ9NPH3 570 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 WDR45Q9Y484 360 aa20.39■□□□□ 0.86
LINC01960-201ENST00000563759 DSPPQ9NZW4 1301 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 A0A1W2PNU3 283 aaPredicted RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 TMEM229AB2RXF0 380 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 hCG_2039718K7EN88 272 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 CLOCKO15516 846 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 MAGEA2P43356 314 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 CHRNEQ04844 493 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 NCF4Q15080 339 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 NNATQ16517 81 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 CYP27C1Q4G0S4 372 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 OGFRL1Q5TC84 451 aaPredicted RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF517Q6ZMY9 492 aaPredicted RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF321PQ8N8H1 164 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 ZNF721Q8TF20 911 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 GEMIN6Q8WXD5 167 aaKnown RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 RMND5BQ96G75 393 aaPredicted RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 SDF2Q99470 211 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 BDH2Q9BUT1 245 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 CACYBPQ9HB71 228 aaKnown RBP20.39■□□□□ 0.85
LINC01960-201ENST00000563759 Q9N2J8 555 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 CFL2Q9Y281 166 aa20.39■□□□□ 0.85
LINC01960-201ENST00000563759 SH3GLB1Q9Y371 365 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms