RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 PIP5K1CO60331 668 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 HBE1P02100 147 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 ALPPL2P10696 532 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 KIAA1211LQ6NV74 962 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.96□□□□□ -1.46
CLK3-212ENST00000563418 SYT11Q9BT88 431 aa5.96□□□□□ -1.46
CLK3-212ENST00000563418 KHNYNO15037 678 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZBTB7AO95365 584 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 IFNA5P01569 189 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PPP1R8Q12972 351 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 RAB11BQ15907 218 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 GXYLT1Q4G148 440 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 HEPHL1Q6MZM0 1159 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SLC35D2Q76EJ3 337 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 FAM217AQ8IXS0 508 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CMIPQ8IY22 773 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 OR1J2Q8NGS2 313 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TM6SF2Q9BZW4 377 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TINAGL1Q9GZM7 467 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 MMP26Q9NRE1 261 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 POLLQ9UGP5 575 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZNF230Q9UIE0 474 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 IKZF2Q9UKS7 526 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 A0A0A6YYH2 397 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 A6NJ64 397 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 YY2O15391 372 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 FFAR2O15552 330 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PGAM2P15259 253 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZNF30P17039 623 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SOX9P48436 509 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SNRPGP62308 76 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 GINS1Q14691 196 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CELF3Q5SZQ8 465 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 SLC16A12Q6ZSM3 486 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 KANSL1Q7Z3B3 1105 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SHARPINQ9H0F6 387 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SLCO5A1Q9H2Y9 848 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PDZD7Q9H5P4 517 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 KIAA1522Q9P206 1035 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 KLHL42Q9P2K6 505 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ARFGEF2Q9Y6D5 1785 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NR2C1P13056 603 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ANXA7P20073 488 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 GDI1P31150 447 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 FRKP42685 505 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 LIMK1P53667 647 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 EPHA4P54764 986 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 IFITM2Q01629 132 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 BOP1Q14137 746 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 GPR176Q14439 515 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 RAET1GQ6H3X3 334 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NADSYN1Q6IA69 706 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 OR5D16Q8NGK9 328 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 POC1BQ8TC44 478 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 APH1BQ8WW43 257 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MOAP1Q96BY2 351 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 LINC00052Q96N35 136 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CD180Q99467 661 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SEC11CQ9BY50 192 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SEMA4CQ9C0C4 833 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 AGO3Q9H9G7 860 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 KDM3BQ7LBC6 1761 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 K7ERU9 68 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NRP1O14786 923 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 FZD7O75084 574 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZNF41P51814 821 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 F2RL1P55085 397 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ETFDHQ16134 617 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TMEM88Q6PEY1 159 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 LRRC52Q8N7C0 313 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLK3-212ENST00000563418 OR51I1Q9H343 314 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NMNAT1Q9HAN9 279 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 GSKIPQ9P0R6 139 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ETV7Q9Y603 341 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 LRRC37A3O60309 1634 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 GLUD1P00367 558 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 HTR1AP08908 422 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZNF286BP0CG31 522 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 GABRR2P28476 465 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PRSS3P35030 304 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PCGF2P35227 344 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CCR9P51686 369 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TBX4P57082 545 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 DLK1P80370 383 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ARMC12Q5T9G4 340 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CPZQ66K79 652 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MAVSQ7Z434 540 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 VTCN1Q7Z7D3 282 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 APOBEC3FQ8IUX4 373 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 OR5M8Q8NGP6 311 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PHYHIPQ92561 330 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MYOCQ99972 504 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NELFAQ9H3P2 528 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 THSD1Q9NS62 852 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 POLR1DQ9Y2S0 133 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 DIP2BQ9P265 1576 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CITO14578 2027 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TJP1Q07157 1748 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NPIPA2E9PIF3 369 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms