RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MEAF6Q9HAF1 191 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 NMUR1Q9HB89 426 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 RAB18Q9NP72 206 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TRPV5Q9NQA5 729 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 AGPAT5Q9NUQ2 364 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 NUDT4Q9NZJ9 180 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 GHRLQ9UBU3 117 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 XPO7Q9UIA9 1087 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 B9D1Q9UPM9 204 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 CACNA1FO60840 1977 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 KDRP35968 1356 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IGHV4-30-2A0A087WSY4 118 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IGKV3D-20A0A0C4DH25 116 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TRGV8A0A0C4DH27 118 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IGHV3-38A0A0C4DH36 116 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TRBV5-4A0A0C4DH59 114 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TEX48A0A1B0GUV7 120 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CLRN2A0PK11 232 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 FAM74A7A6NL05 159 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 NPIPA2E9PIF3 369 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TRAFD1O14545 582 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CYB561D2O14569 222 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ANGPT2O15123 496 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SORBS2O94875 1100 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ANP32DO95626 131 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ECDO95905 644 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IGSF6O95976 241 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IQCF3P0C7M6 154 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 GLRA2P23416 452 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 DPP4P27487 766 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 PBLDP30039 288 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 AXLP30530 894 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 FCGR2CP31995 323 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RPL9P32969 192 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RDXP35241 583 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 HMGCLP35914 325 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ZFP36L2P47974 494 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RGS4P49798 205 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC7A2P52569 658 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 NDUFV3P56181 108 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 HAND2P61296 217 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ERVK-16P61578 105 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 UBE2HP62256 183 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 MRPS6P82932 125 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CDKL1Q00532 357 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 BNIP1Q12981 228 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IL24Q13007 206 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CHIT1Q13231 466 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TFDP1Q14186 410 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ZSWIM7Q19AV6 140 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 GLIPR1L2Q4G1C9 344 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 FAM74A3Q4VXF1 159 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SEL1L2Q5TEA6 688 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CBLN3Q6UW01 205 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 REG3GQ6UW15 175 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 APOOLQ6UXV4 268 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF562Q6V9R5 426 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 PAQR9Q6ZVX9 377 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 STXBP4Q6ZWJ1 553 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 DPY19L4Q7Z388 723 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 GPR142Q7Z601 462 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TSEN54Q7Z6J9 526 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CBWD2Q8IUF1 395 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CCDC71Q8IV32 467 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SUMF1Q8NBK3 374 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 OR52M1Q8NGK5 317 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 OR2T3Q8NH03 318 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SPPL2AQ8TCT8 520 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF606Q8WXB4 792 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 C11orf52Q96A22 123 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 C18orf25Q96B23 403 aaPredicted RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 UPRTQ96BW1 309 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 BIRC7Q96CA5 298 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SLC25A36Q96CQ1 311 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 ELMO2Q96JJ3 720 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 TSPAN18Q96SJ8 248 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 IWS1Q96ST2 819 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 VGLL1Q99990 258 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 WRAP53Q9BUR4 548 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 LRRC61Q9BV99 259 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RBM24Q9BX46 236 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RAB11FIP5Q9BXF6 653 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 MRPL13Q9BYD1 178 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 DEPPQ9NTK1 212 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 DCAF13Q9NV06 445 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 RBM28Q9NW13 759 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 DUS2Q9NX74 493 aaKnown RBP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SEC14L4Q9UDX3 406 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 HPCAL4Q9UM19 191 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 MGAT4AQ9UM21 535 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 CLEC4AQ9UMR7 237 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 PTPRUQ92729 1446 aa2.66□□□□□ -1.98
SHCBP1-202ENST00000563219 SYNJ2BP-COX16A0A087WUM0 186 aa2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 LRIT2A6NDA9 550 aa2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 E9PQ18 207 aa2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 PDHXO00330 501 aa2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 ARPC1BO15143 372 aaKnown RBP2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 ALOX15BO15296 676 aa2.65□□□□□ -1.99
SHCBP1-202ENST00000563219 BUB1O43683 1085 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms