RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TMEM156Q8N614 296 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 FAM98AQ8NCA5 519 aaKnown RBP14.44□□□□□ -0.1
USB1-208ENST00000563207 OR7A2PQ8NGA2 310 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 TMEM125Q96AQ2 219 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 RILPQ96NA2 401 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 OR10A5Q9H207 317 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 KLHL14Q9P2G3 628 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 PRODH2Q9UF12 536 aa14.44□□□□□ -0.1
USB1-208ENST00000563207 E9PBE3 544 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 HRKO00198 91 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 CDC40O60508 579 aaKnown RBP eCLIP14.43□□□□□ -0.1
USB1-208ENST00000563207 CT62P0C5K7 136 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 LAMP1P11279 417 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 LSP1P33241 339 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 SOX3P41225 446 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ATP4BP51164 291 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ARFIP2P53365 341 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 RNF4P78317 190 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 PRSS53Q2L4Q9 553 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 MPEG1Q2M385 716 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ZNF385BQ569K4 471 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ANXA8L1Q5VT79 327 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ANKRD26P1Q6NSI1 321 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 XKRXQ6PP77 449 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 IL20RBQ6UXL0 311 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 RPTNQ6XPR3 784 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ZNF615Q8N8J6 731 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 C17orf47Q8NEP4 570 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 ADCY4Q8NFM4 1077 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 OR9A2Q8NGT5 310 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 RFWD2Q8NHY2 731 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 PSMA8Q8TAA3 256 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 OR5P2Q8WZ92 322 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 DMRTA2Q96SC8 542 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 NSRP1Q9H0G5 558 aaKnown RBP14.43□□□□□ -0.1
USB1-208ENST00000563207 DEFB127Q9H1M4 99 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 RABEP2Q9H5N1 569 aa14.43□□□□□ -0.1
USB1-208ENST00000563207 NUP214P35658 2090 aaPredicted RBP14.43□□□□□ -0.1
USB1-208ENST00000563207 A0A1W2PRB8 838 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 GMNCA6NCL1 334 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 RNASET2O00584 256 aaKnown RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 TFECO14948 347 aaPredicted RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 COQ9O75208 318 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 IL6P05231 212 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 GPC1P35052 558 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 SSR4P51571 173 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 KRTAP10-9P60411 292 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 UFM1P61960 85 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 DCAF7P61962 342 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 PSPHP78330 225 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 PGS1Q32NB8 556 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 TMEM198Q66K66 360 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 FAM111BQ6SJ93 734 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 C16orf52Q8NHV5 167 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 TP53INP1Q96A56 240 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 CIDECQ96AQ7 238 aaPredicted RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 ELP4Q96EB1 424 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 THOC1Q96FV9 657 aaKnown RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 RASL10BQ96S79 203 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 TMEM120AQ9BXJ8 343 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 TRIM8Q9BZR9 551 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 C3orf14Q9HBI5 128 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 NEUROD4Q9HD90 331 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 FAM120CQ9NX05 1096 aaKnown RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 TAS2R9Q9NYW1 312 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 NTMQ9P121 344 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 MYOTQ9UBF9 498 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 C19orf53Q9UNZ5 99 aaPredicted RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 KLF13Q9Y2Y9 288 aaPredicted RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 YARS2Q9Y2Z4 477 aaKnown RBP14.42□□□□□ -0.1
USB1-208ENST00000563207 CACNA1CQ13936 2221 aa14.42□□□□□ -0.1
USB1-208ENST00000563207 NCKAP5O14513 1909 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 PRSS51A0A1B0GVH4 220 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 FAM166BA8MTA8 275 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 KLRC4-KLRK1H3BQV0 150 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 CBX7O95931 251 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 CLPSP04118 112 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 SSTR4P31391 388 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 S100A3P33764 101 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 SOX18P35713 384 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 GNGT1P63211 74 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 SQLEQ14534 574 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 EBPQ15125 230 aaKnown RBP14.41□□□□□ -0.1
USB1-208ENST00000563207 LTB4RQ15722 352 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 FAM174BQ3ZCQ3 159 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 TRMT12Q53H54 448 aaKnown RBP14.41□□□□□ -0.1
USB1-208ENST00000563207 EMC4Q5J8M3 183 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 HLA-DQA1Q5Y7H0 255 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 CGB2Q6NT52 195 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 MTFR2Q6P444 385 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 ZNF551Q7Z340 670 aaPredicted RBP14.41□□□□□ -0.1
USB1-208ENST00000563207 CD163Q86VB7 1156 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 C9orf40Q8IXQ3 194 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 OR2L13Q8N349 312 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 SLC15A4Q8N697 577 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 ZFP62Q8NB50 900 aaPredicted RBP14.41□□□□□ -0.1
USB1-208ENST00000563207 PSD4Q8NDX1 1056 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 KAT2AQ92830 837 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 TNFRSF10DQ9UBN6 386 aa14.41□□□□□ -0.1
USB1-208ENST00000563207 BCAP29Q9UHQ4 241 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms