RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MAPRE3Q9UPY8 281 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 ERVK-11Q9UQG0 969 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 GPR45Q9Y5Y3 372 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 CHCHD2Q9Y6H1 151 aaPredicted RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 USH1CQ9Y6N9 552 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
CNOT1-204ENST00000563130 NBASA2RRP1 2371 aa5.7□□□□□ -1.5
CNOT1-204ENST00000563130 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 GOLGA8QA0A0J9YX86 632 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 GOLGA8OA6NCC3 632 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 FRG2CA6NGY1 282 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TCP11X1B4DZS4 312 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 GOLGA8NF8WBI6 632 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ACOX3O15254 700 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 NME6O75414 186 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CBX6O95503 412 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 DDX5P17844 614 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ABCD3P28288 659 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TDGF1P3P51864 188 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 MANFP55145 182 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 WNT3P56703 355 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PHC1P78364 1004 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 MAPKAPK3Q16644 382 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 EXOSC6Q5RKV6 272 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 HLA-DQA1Q5Y7H0 255 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 NPSR1Q6W5P4 371 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 C1orf229Q6ZS94 237 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SPATA19Q7Z5L4 167 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SULF2Q8IWU5 870 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TAGAPQ8N103 731 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 BCORP1Q8N888 145 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ZFP62Q8NB50 900 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 GALNT11Q8NCW6 608 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CEP70Q8NHQ1 597 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ZFP28Q8NHY6 868 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 STON2Q8WXE9 905 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 NR4A3Q92570 626 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM125Q96AQ2 219 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 GIMAP5Q96F15 307 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 OR52B2Q96RD2 323 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PRPF18Q99633 342 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 DUSP26Q9BV47 211 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 BHLHE41Q9C0J9 482 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CLMPQ9H6B4 373 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 FOLH1BQ9HBA9 442 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PROK2Q9HC23 129 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 AGPAT4Q9NRZ5 378 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 KLF13Q9Y2Y9 288 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 A0A1W2PRB8 838 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SHISA8B8ZZ34 492 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 KLRC4-KLRK1H3BQV0 150 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PEX1O43933 1283 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 EDF1O60869 148 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 COQ9O75208 318 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ERN1O75460 977 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CRYABP02511 175 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ABCB1P08183 1280 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CCL3P10147 92 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 MRPL19P49406 292 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CDK9P50750 372 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 NRG3P56975 720 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CORO7P57737 925 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PSPHP78330 225 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PMP22Q01453 160 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 FOXO1Q12778 655 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 HSPB3Q12988 150 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 RPS6KA2Q15349 733 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 DPY19L1Q2PZI1 675 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 LSM12Q3MHD2 195 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SLC22A10Q63ZE4 541 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM198Q66K66 360 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM81Q6P7N7 255 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 FAM180AQ6UWF9 173 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 TMEM64Q6YI46 380 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 CPSF7Q8N684 471 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ARFGAP2Q8N6H7 521 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 POGLUT1Q8NBL1 392 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 OR5P2Q8WZ92 322 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SECISBP2Q96T21 854 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 EBF4Q9BQW3 602 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 LMF2Q9BU23 707 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 DPY30Q9C005 99 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 SDR39U1Q9NRG7 319 aaPredicted RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 OLAHQ9NV23 265 aa5.69□□□□□ -1.5
CNOT1-204ENST00000563130 DDX18Q9NVP1 670 aaKnown RBP5.69□□□□□ -1.5
CNOT1-204ENST00000563130 ELOA3CA0A087WX78 387 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-204ENST00000563130 PINLYPA6NC86 204 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 ELOA3DA6NLF2 546 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-204ENST00000563130 ADARB2-AS1A8MUL3 147 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 RNASET2O00584 256 aaKnown RBP5.68□□□□□ -1.5
CNOT1-204ENST00000563130 PPM1BO75688 479 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 WISP2O76076 250 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 EDN3P14138 238 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 IDO1P14902 403 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 EFNA1P20827 205 aaPredicted RBP5.68□□□□□ -1.5
CNOT1-204ENST00000563130 CNR1P21554 472 aa5.68□□□□□ -1.5
CNOT1-204ENST00000563130 MST1P26927 711 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms