RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 OR10H1Q9Y4A9 318 aa15.39■□□□□ 0.05
CLK3-210ENST00000563112 ADGRG4Q8IZF6 3080 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 A0A087WV62 115 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 HSPB2A8KAH6 182 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 CT45A8P0DMV1 189 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 CT45A9P0DMV2 189 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 NEFHP12036 1026 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 CORO7P57737 925 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 CRYZQ08257 329 aaKnown RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 ZNF155Q12901 538 aaPredicted RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 HSPB2Q16082 182 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 SLC25A35Q3KQZ1 300 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 EIPR1Q53HC9 387 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 CT45A2Q5DJT8 189 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 WIPI1Q5MNZ9 446 aaPredicted RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 VASNQ6EMK4 673 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 DESI1Q6ICB0 168 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 EMBQ6PCB8 327 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 LARP4Q71RC2 724 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLK3-210ENST00000563112 SLC44A2Q8IWA5 706 aaPredicted RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 CLYBLQ8N0X4 340 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 ACBD4Q8NC06 268 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 ABTB1Q969K4 478 aaPredicted RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 NTNG2Q96CW9 530 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 C14orf79Q96F83 325 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 SLC35A4Q96G79 324 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 LURAP1Q96LR2 239 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 ADOQ96SZ5 270 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 EML4Q9HC35 981 aaKnown RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 SLC24A3Q9HC58 644 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 TNFRSF12AQ9NP84 129 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 EXO1Q9UQ84 846 aaKnown RBP15.38■□□□□ 0.05
CLK3-210ENST00000563112 CAMK2AQ9UQM7 478 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 SLC6A5Q9Y345 797 aa15.38■□□□□ 0.05
CLK3-210ENST00000563112 C2orf72A6NCS6 295 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 NPIPB8E9PQR5 432 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 EPPINO95925 133 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 BMP7P18075 431 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 MSX1P28360 303 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 ADH7P40394 386 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 PTGDSP41222 190 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 PNLIPRP2P54317 469 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 TLE4Q04727 773 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 TFF3Q07654 80 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 ZNHIT3Q15649 155 aaPredicted RBP15.37■□□□□ 0.05
CLK3-210ENST00000563112 NHSL2Q5HYW2 709 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 FAM83FQ8NEG4 500 aaPredicted RBP15.37■□□□□ 0.05
CLK3-210ENST00000563112 FAM111AQ96PZ2 611 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 TREX2Q9BQ50 279 aaPredicted RBP15.37■□□□□ 0.05
CLK3-210ENST00000563112 UGT2B28Q9BY64 529 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 PRDM14Q9GZV8 571 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 GALNT9Q9HCQ5 603 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 DDX18Q9NVP1 670 aaKnown RBP15.37■□□□□ 0.05
CLK3-210ENST00000563112 LGALS13Q9UHV8 139 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 C19orf53Q9UNZ5 99 aaPredicted RBP15.37■□□□□ 0.05
CLK3-210ENST00000563112 MAPRE3Q9UPY8 281 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 CCL27Q9Y4X3 112 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 FBN2P35556 2912 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 POLQO75417 2590 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 HCFC1P51610 2035 aa15.37■□□□□ 0.05
CLK3-210ENST00000563112 ARHGAP21Q5T5U3 1957 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 PLOD2O00469 737 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 NPHS1O60500 1241 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 TSPAN2O60636 221 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 NME6O75414 186 aaPredicted RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 SLU7O95391 586 aaKnown RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 ACTL6AO96019 429 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 IL2RAP01589 272 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 CAPN3P20807 821 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 ALDH3A1P30838 453 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 MC3RP41968 323 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 KIAA0040Q15053 153 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 PRSS53Q2L4Q9 553 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 CYP27C1Q4G0S4 372 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 ACSF3Q4G176 576 aaPredicted RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 SH2D4BQ5SQS7 431 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 KANK2Q63ZY3 851 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 WDR93Q6P2C0 686 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 TMEM107Q6UX40 140 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 NPSR1Q6W5P4 371 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 RNF165Q6ZSG1 346 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 WDR53Q7Z5U6 358 aaPredicted RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 YRDCQ86U90 279 aaKnown RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 PLCZ1Q86YW0 608 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 LACC1Q8IV20 430 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 OR14L1PQ8NHC6 308 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 AENQ8WTP8 325 aaKnown RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 AMDHD1Q96NU7 426 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 GLIPR2Q9H4G4 154 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 SERHLQ9NQF3 203 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 NPDC1Q9NQX5 325 aaPredicted RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 MRTO4Q9UKD2 239 aaKnown RBP15.36■□□□□ 0.05
CLK3-210ENST00000563112 TMED5Q9Y3A6 229 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 TRAF6Q9Y4K3 522 aa15.36■□□□□ 0.05
CLK3-210ENST00000563112 PDZD2O15018 2839 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 DVL2O14641 736 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 PDPK1O15530 556 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 SPAG7O75391 227 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 FGF4P08620 206 aa15.35■□□□□ 0.05
CLK3-210ENST00000563112 LINC00032P0C843 101 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms