RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 IGFL2Q6UWQ7 119 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 NPSR1Q6W5P4 371 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 ASB18Q6ZVZ8 466 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 RETREG3Q86VR2 466 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 SLC34A3Q8N130 599 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 HORMAD2Q8N7B1 307 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 COX18Q8N8Q8 333 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 ZFP90Q8TF47 636 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 HOXB13Q92826 284 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-207ENST00000563109 TPT1P8Q9HAU6 139 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 IL1RL2Q9HB29 575 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 DUSP22Q9NRW4 184 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 SLC6A13Q9NSD5 602 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 GID8Q9NWU2 228 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 GIN1Q9NXP7 522 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 PKD1L2Q7Z442 2459 aa17.38■□□□□ 0.37
RAB40C-207ENST00000563109 FBP2O00757 339 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 OR6B1O95007 311 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 NKX2-2O95096 273 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 AGR2O95994 175 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 F10P00742 488 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 ABCD3P28288 659 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PTPN6P29350 595 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 IL12BP29460 328 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 MAGEA8P43361 318 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PSMD4P55036 377 aaKnown RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 TUBA3CQ13748 450 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 DUSP5Q16690 384 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 DECR1Q16698 335 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 CYP27C1Q4G0S4 372 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 ATAD3BQ5T9A4 648 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 TUBA3EQ6PEY2 450 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 IGFL3Q6UXB1 125 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 RNF130Q86XS8 419 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PRR22Q8IZ63 422 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 CYP4Z2PQ8N1L4 340 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 SLC16A11Q8NCK7 471 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PNPT1Q8TCS8 783 aaKnown RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 MIPOL1Q8TD10 442 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 HAS2Q92819 552 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 RCN3Q96D15 328 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 SPACA9Q96E40 222 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 OMA1Q96E52 524 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 OTUB1Q96FW1 271 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 WBP1Q96G27 269 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 OR7D2Q96RA2 312 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 UBL7Q96S82 380 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.37■□□□□ 0.373e-7■■■■□ 21.9
RAB40C-207ENST00000563109 OR51I1Q9H343 314 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PIGUQ9H490 435 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 ZBTB20Q9HC78 741 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-207ENST00000563109 ANKRD10Q9NXR5 420 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 PLA2G3Q9NZ20 509 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 CBLCQ9ULV8 474 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 CORO2BQ9UQ03 480 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 NPFFR2Q9Y5X5 522 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 EXPH5Q8NEV8 1989 aa17.37■□□□□ 0.37
RAB40C-207ENST00000563109 LAMA5O15230 3695 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 EVPLLA8MZ36 301 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 CLIC1O00299 241 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 ASNA1O43681 348 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 NPPAP01160 153 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 FBXO45P0C2W1 286 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 HOXB9P17482 250 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 MAP3K8P41279 467 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 POU6F2P78424 691 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 MRPS22P82650 360 aaKnown RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 TNFAIP8L2Q6P589 184 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 IL20RBQ6UXL0 311 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 OR52N2Q8NGI0 321 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 OR5D16Q8NGK9 328 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 PIK3R3Q92569 461 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 CDS1Q92903 461 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 TMBIM1Q969X1 311 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 TMEM125Q96AQ2 219 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 RMND5BQ96G75 393 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 AURKBQ96GD4 344 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 CGREF1Q99674 301 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 BTBD2Q9BX70 525 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 ZNF71Q9NQZ8 489 aaPredicted RBP17.36■□□□□ 0.37
RAB40C-207ENST00000563109 EXD2Q9NVH0 621 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 SLC25A37Q9NYZ2 338 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 VAPAQ9P0L0 249 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 SLAMF8Q9P0V8 285 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 LRFN1Q9P244 771 aa17.36■□□□□ 0.37
RAB40C-207ENST00000563109 CFAP47Q6ZTR5 3102 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 AIM2O14862 343 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 ABCB7O75027 752 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 REM1O75628 298 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 PPM1BO75688 479 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 AK1P00568 194 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 PDGFAP04085 211 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 NAGAP17050 411 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 CD96P40200 585 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 CRATP43155 626 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 ST13P50502 369 aaKnown RBP17.35■□□□□ 0.37
RAB40C-207ENST00000563109 CASP9P55211 416 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 RPP38P78345 283 aaKnown RBP17.35■□□□□ 0.37
RAB40C-207ENST00000563109 OR1C1Q15619 314 aa17.35■□□□□ 0.37
RAB40C-207ENST00000563109 EXOSC6Q5RKV6 272 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms