RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 PROK2Q9HC23 129 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 SH2D2AQ9NP31 389 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 KLHL1Q9NR64 748 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 DEPPQ9NTK1 212 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLK3-208ENST00000562626 SLC25A37Q9NYZ2 338 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 LRFN1Q9P244 771 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 MAPRE3Q9UPY8 281 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 YARS2Q9Y2Z4 477 aaKnown RBP9.02□□□□□ -0.97
CLK3-208ENST00000562626 PCDHGB7Q9Y5F8 929 aa9.02□□□□□ -0.97
CLK3-208ENST00000562626 TRBV5-3A0A0A0MS03 114 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PRAMEF27A3QJZ7 478 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 FRG2CA6NGY1 282 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 CCDC154A6NI56 674 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 B4DXG7 233 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TSPAN2O60636 221 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 DPM1O60762 260 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 UGT2B11O75310 529 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 SLITRK5O94991 958 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 NKX2-2O95096 273 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 IL6P05231 212 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PLA2G2AP14555 144 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 DRD5P21918 477 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 ABCD3P28288 659 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 MVDP53602 400 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 OC90Q02509 493 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 COX20Q5RI15 118 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 ANXA8L1Q5VT79 327 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 METTL21CQ5VZV1 264 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 HLA-DQA1Q5Y7H0 255 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 SAXO2Q658L1 398 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 C6orf120Q7Z4R8 191 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 CPLX4Q7Z7G2 160 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 LSRQ86X29 649 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 SLC44A2Q8IWA5 706 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 ZNF843Q8N446 348 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 ZADH2Q8N4Q0 377 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TMEM156Q8N614 296 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 POU5F2Q8N7G0 328 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 C17orf47Q8NEP4 570 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PNPT1Q8TCS8 783 aaKnown RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 SFXN5Q8TD22 340 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 CDS1Q92903 461 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 HGDQ93099 445 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TMBIM1Q969X1 311 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TP53INP1Q96A56 240 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 EFHD2Q96C19 240 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 SPACA9Q96E40 222 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 OMA1Q96E52 524 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 SLC35A4Q96G79 324 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 SCMH1Q96GD3 660 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 MS4A4EQ96PG1 132 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PANX1Q96RD7 426 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TAAR6Q96RI8 345 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 NODALQ96S42 347 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 UTP23Q9BRU9 249 aaKnown RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 SLC35A5Q9BS91 424 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 CCDC106Q9BWC9 280 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 MYLK2Q9H1R3 596 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 EPN3Q9H201 632 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 IKZF5Q9H5V7 419 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PRODH2Q9UF12 536 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TEKT2Q9UIF3 430 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 PCDHGA10Q9Y5H3 936 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 NPFFR2Q9Y5X5 522 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
CLK3-208ENST00000562626 SPTA1P02549 2419 aa9.01□□□□□ -0.97
CLK3-208ENST00000562626 TENM4Q6N022 2769 aa9□□□□□ -0.97
CLK3-208ENST00000562626 DYTNA2CJ06 578 aa9□□□□□ -0.97
CLK3-208ENST00000562626 TO15178 435 aa9□□□□□ -0.97
CLK3-208ENST00000562626 COQ9O75208 318 aa9□□□□□ -0.97
CLK3-208ENST00000562626 BCAS2O75934 225 aaPredicted RBP9□□□□□ -0.97
CLK3-208ENST00000562626 UQCRC2P22695 453 aa9□□□□□ -0.97
CLK3-208ENST00000562626 GABRA3P34903 492 aa9□□□□□ -0.97
CLK3-208ENST00000562626 RFC3P40938 356 aa9□□□□□ -0.97
CLK3-208ENST00000562626 PTGDSP41222 190 aa9□□□□□ -0.97
CLK3-208ENST00000562626 CYB561P49447 251 aa9□□□□□ -0.97
CLK3-208ENST00000562626 KCNK10P57789 538 aa9□□□□□ -0.97
CLK3-208ENST00000562626 GPR85P60893 370 aa9□□□□□ -0.97
CLK3-208ENST00000562626 FUT5Q11128 374 aa9□□□□□ -0.97
CLK3-208ENST00000562626 SELPLGQ14242 412 aa9□□□□□ -0.97
CLK3-208ENST00000562626 ZNF169Q14929 603 aaPredicted RBP9□□□□□ -0.97
CLK3-208ENST00000562626 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
CLK3-208ENST00000562626 MAPK11Q15759 364 aa9□□□□□ -0.97
CLK3-208ENST00000562626 NTRK2Q16620 822 aa9□□□□□ -0.97
CLK3-208ENST00000562626 SPDYE7PQ495Y7 208 aa9□□□□□ -0.97
CLK3-208ENST00000562626 ZNF766Q5HY98 468 aa9□□□□□ -0.97
CLK3-208ENST00000562626 RNFT1Q5M7Z0 435 aa9□□□□□ -0.97
CLK3-208ENST00000562626 CCNJQ5T5M9 372 aa9□□□□□ -0.97
CLK3-208ENST00000562626 PRAMEF20Q5VT98 475 aa9□□□□□ -0.97
CLK3-208ENST00000562626 DLEU7Q6UYE1 221 aa9□□□□□ -0.97
CLK3-208ENST00000562626 ZNF621Q6ZSS3 439 aa9□□□□□ -0.97
CLK3-208ENST00000562626 GALNTL5Q7Z4T8 443 aa9□□□□□ -0.97
CLK3-208ENST00000562626 MTDHQ86UE4 582 aaKnown RBP9□□□□□ -0.97
CLK3-208ENST00000562626 SLC34A3Q8N130 599 aa9□□□□□ -0.97
CLK3-208ENST00000562626 NATD1Q8N6N6 113 aa9□□□□□ -0.97
CLK3-208ENST00000562626 HORMAD2Q8N7B1 307 aa9□□□□□ -0.97
CLK3-208ENST00000562626 BCORP1Q8N888 145 aa9□□□□□ -0.97
CLK3-208ENST00000562626 OR56A1Q8NGH5 318 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms