RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 LINC00471Q8N535 108 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 OR6X1Q8NH79 312 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 UBA3Q8TBC4 463 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 GNPDA2Q8TDQ7 276 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 SMAP2Q8WU79 429 aaPredicted RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 C15orf40Q8WUR7 153 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 XAGE5Q8WWM1 108 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 KCTD13Q8WZ19 329 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 WNT8BQ93098 351 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 PNPLA2Q96AD5 504 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 PABPC5Q96DU9 382 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 MALSU1Q96EH3 234 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 KCNC2Q96PR1 638 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 SLC2A13Q96QE2 648 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 KCNA7Q96RP8 456 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 TSNAXQ99598 290 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 AARSD1Q9BTE6 412 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 COLEC11Q9BWP8 271 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 JAM3Q9BX67 310 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 SEC11CQ9BY50 192 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 DUSP16Q9BY84 665 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 ZNF768Q9H5H4 540 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 AGO3Q9H9G7 860 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 RPF1Q9H9Y2 349 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 BARX1Q9HBU1 254 aaPredicted RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 SERHLQ9NQF3 203 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 NRBP2Q9NSY0 501 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 NUDT15Q9NV35 164 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 OSER1Q9NX31 292 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 TAS2R5Q9NYW4 299 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 NUDT4Q9NZJ9 180 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 PIPOXQ9P0Z9 390 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 COMMD3Q9UBI1 195 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 GIMAP2Q9UG22 337 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 TESQ9UGI8 421 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 EXO1Q9UQ84 846 aaKnown RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 TP53TG5Q9Y2B4 290 aa6.86□□□□□ -1.31
CDH1-203ENST00000561751 RPH3AQ9Y2J0 694 aaPredicted RBP6.86□□□□□ -1.31
CDH1-203ENST00000561751 DOCK1Q14185 1865 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 MEX3AA1L020 520 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 GSAPA4D1B5 854 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 C9JVG2 144 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 GFYI3L273 518 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SUSD5O60279 629 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 FZD7O75084 574 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ADAP00813 363 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 JCHAINP01591 159 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 IGHV2-5P01817 119 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SERPINA5P05154 406 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SERPIND1P05546 499 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 CRYBA1P05813 215 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 OSMP13725 252 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 TYRP1P17643 537 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 AGAP20933 346 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 HTR2AP28223 471 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 PCGF2P35227 344 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 HTR5AP47898 357 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 IDH2P48735 452 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 RBP2P50120 134 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 CDKN2DP55273 166 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RAB2AP61019 212 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 WDR5P61964 334 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 ACY1Q03154 408 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SLC3A1Q07837 685 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RAB40BQ12829 278 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 PPP1R8Q12972 351 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 CHAF1BQ13112 559 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 FAM174BQ3ZCQ3 159 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 MINDY4Q4G0A6 757 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 KLHL26Q53HC5 615 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SPOUT1Q5T280 376 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 ZNF660Q6AZW8 331 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 HBMQ6B0K9 141 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 OVOS1Q6IE37 1185 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 NCEH1Q6PIU2 408 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 CD300LDQ6UXZ3 194 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RPS27LQ71UM5 84 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 SERINC5Q86VE9 423 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 LDLRAD3Q86YD5 345 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 C1QL4Q86Z23 238 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 LRRC56Q8IYG6 542 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 TOMM5Q8N4H5 51 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ZBTB2Q8N680 514 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 SLC5A8Q8N695 610 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ARIH2OSQ8N7S6 290 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RTL3Q8N8U3 475 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 TEX19Q8NA77 164 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 POMGNT2Q8NAT1 580 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 BPIFCQ8NFQ6 507 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 DBF4BQ8NFT6 615 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 OR52K2Q8NGK3 314 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 OR52P1PQ8NH57 321 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 COQ8AQ8NI60 647 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 METTL6Q8TCB7 284 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ASZ1Q8WWH4 475 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 CLEC4DQ8WXI8 215 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 TFGQ92734 400 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 RAB24Q969Q5 203 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms