RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 GANCQ8TET4 914 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MRPS31Q92665 395 aaKnown RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 ZNF501Q96CX3 271 aaPredicted RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 OMA1Q96E52 524 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 C5orf30Q96GV9 206 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 PGLYRP2Q96PD5 576 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 GAL3ST4Q96RP7 486 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 PCDHB18PQ96TA0 734 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ACBD6Q9BR61 282 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 FAM213AQ9BRX8 229 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 TCHPQ9BT92 498 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CLEC7AQ9BXN2 247 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SLC39A8Q9C0K1 460 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ASB7Q9H672 318 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 MTHFD2LQ9H903 347 aaPredicted RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 ATAD3AQ9NVI7 634 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 DUS2Q9NX74 493 aaKnown RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 TEKT2Q9UIF3 430 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 LNPEPQ9UIQ6 1025 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 NAP1L2Q9ULW6 460 aaPredicted RBP3.23□□□□□ -1.89
HERC1-215ENST00000561436 MMP17Q9ULZ9 603 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 SATB2Q9UPW6 733 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 NCOR1O75376 2440 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 ZDBF2Q9HCK1 2354 aa3.23□□□□□ -1.89
HERC1-215ENST00000561436 CACNA1HO95180 2353 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 A0A087WZ39 114 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 TRAV19A0A0A6YYK7 116 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 TTC26A0AVF1 554 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 MEIOCA2RUB1 952 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ANKDD1BA6NHY2 528 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 C15orf61A6NNL5 157 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PIRO00625 290 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 RRP8O43159 456 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 ZBTB14O43829 449 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ACSL4O60488 711 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 MAGEC1O60732 1142 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 NOL4O94818 638 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PIGRP01833 764 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 MT-ND2P03891 347 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 RNF224P0DH78 156 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 OXTRP30559 389 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 DUTP33316 252 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 IFNAR2P48551 515 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 UCNP55089 124 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ARPP19P56211 112 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 SLC7A9P82251 487 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 CYCSP99999 105 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 PMP22Q01453 160 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 AP1B1Q10567 949 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 CBX3Q13185 183 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 MTF1Q14872 753 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 DUSP5Q16690 384 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 CFAP221Q4G0U5 840 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 FAM106AQ4KMX7 169 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 OTUD3Q5T2D3 398 aaPredicted RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 PRAMEF8Q5VWM4 474 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 BSPRYQ5W0U4 402 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 OR4C11Q6IEV9 310 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PWWP2BQ6NUJ5 590 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ALKBH5Q6P6C2 394 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 CD164L2Q6UWJ8 174 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 SIGLEC15Q6ZMC9 328 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 Q6ZSR9 355 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 RFPL4BQ6ZWI9 263 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 BTN2A1Q7KYR7 527 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PRSS42Q7Z5A4 293 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PTAR1Q7Z6K3 402 aaPredicted RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 TEX26Q8N6G2 289 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ARL10Q8N8L6 244 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 DEFB124Q8NES8 71 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 OR13C5Q8NGS8 318 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 RPLP0P6Q8NHW5 317 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 GGHQ92820 318 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 BCL2L2Q92843 193 aaPredicted RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 SNX21Q969T3 373 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 NXPE2Q96DL1 559 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PDLIM5Q96HC4 596 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 USP28Q96RU2 1077 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 KRT12Q99456 494 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ASCL2Q99929 193 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 SYT15Q9BQS2 421 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 RBM4Q9BWF3 364 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 OSBPL8Q9BZF1 889 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 C5orf66Q9H5L9 145 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 C3orf14Q9HBI5 128 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 FGF22Q9HCT0 170 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 SCRT2Q9NQ03 307 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 HPS4Q9NQG7 708 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 KLHL8Q9P2G9 620 aaPredicted RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 ERVK-19Q9WJR5 959 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 KCNK6Q9Y257 313 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 ZNF510Q9Y2H8 683 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 MRPS28Q9Y2Q9 187 aaKnown RBP3.22□□□□□ -1.89
HERC1-215ENST00000561436 TMED7Q9Y3B3 224 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 CFAP47Q6ZTR5 3102 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 PLXNA3P51805 1871 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 KMT2EQ8IZD2 1858 aa3.22□□□□□ -1.89
HERC1-215ENST00000561436 C5orf42Q9H799 3197 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 REV3LO60673 3130 aa3.21□□□□□ -1.9
HERC1-215ENST00000561436 hCG_38984A0A1B0GV85 526 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms