RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 TACR1P25103 407 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 ELAVL4P26378 380 aaKnown RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 ZFP36L2P47974 494 aaKnown RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 NOXRED1Q6NXP6 359 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 SLC30A6Q6NXT4 461 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 TMEM81Q6P7N7 255 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 TMEM107Q6UX40 140 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 RIBC1Q8N443 379 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 FAM83FQ8NEG4 500 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 COL21A1Q96P44 957 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 FAM111AQ96PZ2 611 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 TREX2Q9BQ50 279 aaPredicted RBP15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 MECRQ9BV79 373 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 SERHLQ9NQF3 203 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 CCL27Q9Y4X3 112 aa15.7■□□□□ 0.1
CDC42BPB-208ENST00000561271 HRNRQ86YZ3 2850 aaPredicted RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 OR6C70A6NIJ9 312 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 ENO4A6NNW6 628 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 TMEM233B4DJY2 109 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 AZIN1O14977 448 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 PLOD3O60568 738 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 SEC22BO75396 215 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 CHRNGP07510 517 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 IL12BP29460 328 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 SSTR2P30874 369 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 NTSP30990 170 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 MPIP34949 423 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 KRTAP10-9P60411 292 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 IFFO1Q0D2I5 559 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 ACSF3Q4G176 576 aaPredicted RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 SEM1Q6ZVN7 128 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 YRDCQ86U90 279 aaKnown RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 LIX1LQ8IVB5 337 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 BANPQ8N9N5 519 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 OR4N2Q8NGD1 307 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 OR2T11Q8NH01 316 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 FAM76AQ8TAV0 307 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 AENQ8WTP8 325 aaKnown RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 EFHD2Q96C19 240 aaPredicted RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 SLC35A4Q96G79 324 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 EGLN2Q96KS0 407 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 ADOQ96SZ5 270 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 TIMP4Q99727 224 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 UGT2B28Q9BY64 529 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 SLC17A7Q9P2U7 560 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 LGALS13Q9UHV8 139 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 CAMK2AQ9UQM7 478 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 PCDHGB3Q9Y5G1 929 aa15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 V9GYY5 206 aaPredicted RBP15.69■□□□□ 0.1
CDC42BPB-208ENST00000561271 CELSR1Q9NYQ6 3014 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 TSPAN2O60636 221 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 TRIM13O60858 407 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 COQ9O75208 318 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 SPAG7O75391 227 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 HOXD4P09016 255 aaPredicted RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 PRPH2P23942 346 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 ALDH3A1P30838 453 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 KRT20P35900 424 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 RPL38P63173 70 aaKnown RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 TLE4Q04727 773 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 KIAA0040Q15053 153 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 SH2D4BQ5SQS7 431 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 RIPPLY2Q5TAB7 128 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 KANK2Q63ZY3 851 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 ANKRD26P1Q6NSI1 321 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 IKBIPQ70UQ0 350 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 LARP4Q71RC2 724 aaKnown RBP eCLIP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 WDR53Q7Z5U6 358 aaPredicted RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 SLC44A2Q8IWA5 706 aaPredicted RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 WDSUB1Q8N9V3 476 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 NAXEQ8NCW5 288 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 GFM2Q969S9 779 aaKnown RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 C14orf79Q96F83 325 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 PRDM14Q9GZV8 571 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 STMN4Q9H169 189 aaPredicted RBP15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 TUBB1Q9H4B7 451 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 GLIPR2Q9H4G4 154 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 LRTM1Q9HBL6 345 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 C1orf109Q9NX04 203 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 TAS2R9Q9NYW1 312 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 OR10H1Q9Y4A9 318 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 WIF1Q9Y5W5 379 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 HEATR5AQ86XA9 2040 aa15.68■□□□□ 0.1
CDC42BPB-208ENST00000561271 C17orf51A8MQB3 221 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 SLC28A1O00337 649 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 RGS14O43566 566 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 ABCB7O75027 752 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 BMP7P18075 431 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 SDC1P18827 310 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 PSG6Q00889 435 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 SNTA1Q13424 505 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 VASNQ6EMK4 673 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 ZCCHC23Q6ZST2 131 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 CLHC1Q8NHS4 586 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 AGR3Q8TD06 166 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 TMCO6Q96DC7 493 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 AMDHD1Q96NU7 426 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 TRMOQ9BU70 441 aa15.67■□□□□ 0.1
CDC42BPB-208ENST00000561271 DDX18Q9NVP1 670 aaKnown RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms