RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 RAB17Q9H0T7 212 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 OR10A5Q9H207 317 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 GALNT9Q9HCQ5 603 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 ACKR4Q9NPB9 350 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 SERHLQ9NQF3 203 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 ZDHHC18Q9NUE0 388 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 MS4A12Q9NXJ0 267 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 CNIH4Q9P003 139 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 BCAP29Q9UHQ4 241 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 PCTPQ9UKL6 214 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 CBLCQ9ULV8 474 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 MAPRE3Q9UPY8 281 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 C15orf41Q9Y2V0 281 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 NPFFR2Q9Y5X5 522 aa6.6□□□□□ -1.35
GABPB1-211ENST00000561010 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.6□□□□□ -1.353e-6■■■■□ 21.7
GABPB1-211ENST00000561010 YLPM1P49750 1951 aaKnown RBP6.6□□□□□ -1.35
GABPB1-211ENST00000561010 FN1P02751 2386 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CSPG4Q6UVK1 2322 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SYNDIG1LA6NDD5 238 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 OR6C76A6NM76 312 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 B4DXG7 233 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 EEF1E1-BLOC1S5C9J1V9 151 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FOXE1O00358 373 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 EEF1E1O43324 174 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ERAL1O75616 437 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 OR4F21O95013 312 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 EPPINO95925 133 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 PDYNP01213 254 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ABCB1P08183 1280 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SBK3P0C264 359 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CTAGE8P0CG41 777 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SLC35E2P0CK97 266 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 GABRA1P14867 456 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CD1EP15812 388 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ATF4P18848 351 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ABCD3P28288 659 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CEACAM8P31997 349 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 PTGDSP41222 190 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CASP3P42574 277 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 STARP49675 285 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SERPINB8P50452 374 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 NAGLUP54802 743 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 MRPS35P82673 323 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SRYQ05066 204 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 MGAT2Q10469 447 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 GALNT1Q10472 559 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FUT7Q11130 342 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FOXF2Q12947 444 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 NAB1Q13506 487 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CUL3Q13618 768 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ACAP2Q15057 778 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FLYWCH1Q4VC44 716 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 TRMT12Q53H54 448 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CCNYL2Q5T2Q4 361 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 HLA-DQA1Q5Y7H0 255 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FRG2Q64ET8 278 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 TMEM198Q66K66 360 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 LETMD1Q6P1Q0 360 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ANGPTL8Q6UXH0 198 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 Q71RC1 249 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 COMMD6Q7Z4G1 85 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CDC20BQ86Y33 519 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 CTAGE4Q8IX94 777 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 TAGAPQ8N103 731 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 C9orf106Q8NAJ2 232 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FAM83FQ8NEG4 500 aaPredicted RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 OR4K14Q8NGD5 310 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 RHEBL1Q8TAI7 183 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SLC44A1Q8WWI5 657 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 REPS1Q96D71 796 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 WDYHV1Q96HA8 205 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 FRG2BQ96QU4 278 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SERPINI1Q99574 410 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 PELOQ9BRX2 385 aaKnown RBP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 UGT2B28Q9BY64 529 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ANGPTL4Q9BY76 406 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 UBQLN3Q9H347 655 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 WDR41Q9HAD4 459 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.59□□□□□ -1.35
GABPB1-211ENST00000561010 MAT2BQ9NZL9 334 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 XPR1Q9UBH6 696 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ADGRE2Q9UHX3 823 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ST6GALNAC2Q9UJ37 374 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 SLC12A4Q9UP95 1085 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 PLLPQ9Y342 182 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 TSC22D4Q9Y3Q8 395 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 ALPK2Q86TB3 2170 aa6.59□□□□□ -1.35
GABPB1-211ENST00000561010 A0A1W2PPR1 153 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 SLC22A31A6NKX4 558 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 A6NNC1 897 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 HSPB2A8KAH6 182 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 TRIM49D1C9J1S8 452 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 POC1B-GALNT4F8VUJ3 575 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 TP53I11O14683 189 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 UGDHO60701 494 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 DNAJA2O60884 412 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 UGT2B11O75310 529 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 CBX7O95931 251 aa6.58□□□□□ -1.36
GABPB1-211ENST00000561010 HPNP05981 417 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms