RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZNF704Q6ZNC4 412 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 PAGE2Q7Z2X7 111 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 RHEBL1Q8TAI7 183 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 TMEM204Q9BSN7 226 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 BRINP2Q9C0B6 783 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 SNX12Q9UMY4 172 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 NBEAL1Q6ZS30 2694 aa16.71■□□□□ 0.26
TPM1-226ENST00000560959 C1orf226A1L170 272 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 HS3ST1O14792 307 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 CBX7O95931 251 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 F12P00748 615 aaPredicted RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 TP53P04637 393 aaPredicted RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 THBDP07204 575 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 C8BP07358 591 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 LTA4HP09960 611 aaKnown RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 CSNK2A2P19784 350 aaPredicted RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 CRABP2P29373 138 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 EMDP50402 254 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 NEK2P51955 445 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 CLDN15P56746 228 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 DR1Q01658 176 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 DLG1Q12959 904 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 EFR3AQ14156 821 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 CLEC12BQ2HXU8 276 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 GRTP1Q5TC63 336 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 TBC1D1Q86TI0 1168 aaPredicted RBP16.7■□□□□ 0.26
TPM1-226ENST00000560959 ZBED8Q8IZ13 594 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 FIG4Q92562 907 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 PLSCR4Q9NRQ2 329 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 EHD3Q9NZN3 535 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 PSME2Q9UL46 239 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 PROCRQ9UNN8 238 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 PLLPQ9Y342 182 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 PCDHA9Q9Y5H5 950 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 ROS1P08922 2347 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 USF3Q68DE3 2245 aa16.7■□□□□ 0.26
TPM1-226ENST00000560959 EFCAB8A8MWE9 144 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 CD5LO43866 347 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 REM1O75628 298 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 BCAS2O75934 225 aaPredicted RBP16.69■□□□□ 0.26
TPM1-226ENST00000560959 KLK1P06870 262 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 NID1P14543 1247 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 GRK2P25098 689 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 IDUAP35475 653 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
TPM1-226ENST00000560959 PIK3CGP48736 1102 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 GAS1P54826 345 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 ALDH18A1P54886 795 aaKnown RBP16.69■□□□□ 0.26
TPM1-226ENST00000560959 GPX6P59796 221 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 SIRPAP78324 504 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 EXOSC7Q15024 291 aaKnown RBP16.69■□□□□ 0.26
TPM1-226ENST00000560959 FAM214BQ7L5A3 538 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 OR52R1Q8NGF1 315 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 PYROXD1Q8WU10 500 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 TMBIM1Q969X1 311 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 REG4Q9BYZ8 158 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 KLHL4Q9C0H6 718 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 OR10A4Q9H209 315 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 IPPKQ9H8X2 491 aa16.69■□□□□ 0.26
TPM1-226ENST00000560959 TNPO3Q9Y5L0 923 aaKnown RBP16.69■□□□□ 0.26
TPM1-226ENST00000560959 FAM159BA6NKW6 160 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 RNF223E7ERA6 249 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 OVOL3O00110 214 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 TSPAN2O60636 221 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 ALDOAP04075 364 aaKnown RBP16.68■□□□□ 0.26
TPM1-226ENST00000560959 PNLIPRP2P54317 469 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 RPS4XP62701 263 aaKnown RBP16.68■□□□□ 0.26
TPM1-226ENST00000560959 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 TRMT12Q53H54 448 aaKnown RBP16.68■□□□□ 0.26
TPM1-226ENST00000560959 CCNYL2Q5T2Q4 361 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 ANKRD34AQ69YU3 496 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 ADAM5Q6NVV9 412 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 GTF2H2CQ6P1K8 395 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 RAPH1Q70E73 1250 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 ERP27Q96DN0 273 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 TRMT61AQ96FX7 289 aaKnown RBP16.68■□□□□ 0.26
TPM1-226ENST00000560959 ADOQ96SZ5 270 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 PINK1Q9BXM7 581 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 FANCFQ9NPI8 374 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 RNF11Q9Y3C5 154 aa16.68■□□□□ 0.26
TPM1-226ENST00000560959 CLDN9O95484 217 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 IL11P20809 199 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 SSTR1P30872 391 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 FEN1P39748 380 aaKnown RBP16.67■□□□□ 0.26
TPM1-226ENST00000560959 SUCLG1P53597 346 aaKnown RBP16.67■□□□□ 0.26
TPM1-226ENST00000560959 MRPS22P82650 360 aaKnown RBP16.67■□□□□ 0.26
TPM1-226ENST00000560959 VEZF1Q14119 521 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 GANABQ14697 944 aaKnown RBP16.67■□□□□ 0.26
TPM1-226ENST00000560959 PFKFB4Q16877 469 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 OR5M10Q6IEU7 315 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 GOLGA7Q7Z5G4 137 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 UBQLNLQ8IYU4 475 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 METTL4Q8N3J2 472 aa16.67■□□□□ 0.26
TPM1-226ENST00000560959 FADS6Q8N9I5 356 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms