RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FAM157CP0CG43 387 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 CREB1P16220 341 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 KRT15P19012 456 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 GPX3P22352 226 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 CNTFP26441 200 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SSTR1P30872 391 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 STX2P32856 288 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 GGT5P36269 586 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SLC18A1P54219 525 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 TAS2R39P59534 338 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 RPS13P62277 151 aaKnown RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 SIRPAP78324 504 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 PCDH1Q08174 1060 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 BIKQ13323 160 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SETDB1Q15047 1291 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 GUSBP1Q15486 140 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 AP5B1Q2VPB7 878 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 BEX5Q5H9J7 111 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 KHDRBS2Q5VWX1 349 aaKnown RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 MRM1Q6IN84 353 aaKnown RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 ENPP6Q6UWR7 440 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 DNM1P46Q6ZS02 220 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SH2D5Q6ZV89 423 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 CPLX4Q7Z7G2 160 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 GPR180Q86V85 440 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 IFNEQ86WN2 208 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 LAS2Q8IYD9 372 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 LRRC34Q8IZ02 419 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 ZNF611Q8N823 705 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SNX31Q8N9S9 440 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 MGARPQ8TDB4 240 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 CKAP2Q8WWK9 683 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 FIG4Q92562 907 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 ZBED6CLQ96FA7 236 aaPredicted RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 PAFAH2Q99487 392 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 TMEM204Q9BSN7 226 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 C19orf24Q9BVV8 132 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 NXF5Q9H1B4 397 aaKnown RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 OR51B5Q9H339 312 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 METTL7AQ9H8H3 244 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 ACTR8Q9H981 624 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 CXorf21Q9HAI6 301 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 SSU72Q9NP77 194 aaKnown RBP8.94□□□□□ -0.98
TPM1-225ENST00000560679 MS4A12Q9NXJ0 267 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 ELOVL5Q9NYP7 299 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 TAS2R10Q9NYW0 307 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 PHF11Q9UIL8 331 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 FBXL2Q9UKC9 423 aa8.94□□□□□ -0.98
TPM1-225ENST00000560679 A0A096LNT2 108 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 A0A1W2PR48 441 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 FRG2CA6NGY1 282 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 SLC22A20A6NK97 555 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 C17orf51A8MQB3 221 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 A8MV72 311 aaPredicted RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 TMPRSS11DO60235 418 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 UGT2B11O75310 529 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 EEDO75530 441 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 AIFM1O95831 613 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 NR2F6P10588 404 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 PCNAP12004 261 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 GALNSP34059 522 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 GCKP35557 465 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 ACVR1BP36896 505 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 CLDN15P56746 228 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 NRG3P56975 720 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 B3GALT5-AS1P59052 145 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 RPS4XP62701 263 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 RPP38P78345 283 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 SRSF2Q01130 221 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 CHIT1Q13231 466 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 MPP2Q14168 576 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 TBCCQ15814 346 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 ETFDHQ16134 617 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 PDK4Q16654 411 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 C6orf52Q5T4I8 152 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 DEPDC1Q5TB30 811 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 GKAP1Q5VSY0 366 aaPredicted RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 OR2A2Q6IF42 318 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 SLC30A6Q6NXT4 461 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 SCIMPQ6UWF3 145 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 C3orf62Q6ZUJ4 267 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 ZC3HC1Q86WB0 502 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 ZCCHC7Q8N3Z6 543 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 SPATA6LQ8N4H0 392 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 NKAPQ8N5F7 415 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 ZNF610Q8N9Z0 462 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 C17orf47Q8NEP4 570 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 DCAKDQ8WVC6 231 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 CFAP36Q96G28 342 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 ZNF845Q96IR2 970 aaPredicted RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 OR10A5Q9H207 317 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 SLCO5A1Q9H2Y9 848 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 EHD3Q9NZN3 535 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 EXO1Q9UQ84 846 aaKnown RBP8.93□□□□□ -0.98
TPM1-225ENST00000560679 LAMP3Q9UQV4 416 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 ASB4Q9Y574 426 aa8.93□□□□□ -0.98
TPM1-225ENST00000560679 A0A0A6YYD5 115 aa8.92□□□□□ -0.98
TPM1-225ENST00000560679 FAM95CA0A1B0GW59 222 aa8.92□□□□□ -0.98
TPM1-225ENST00000560679 TCRBV9S1A1TA0A576 114 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms