RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 SEC24CP53992 1094 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 PRAMEF20Q5VT98 475 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 DNAJC14Q6Y2X3 702 aaPredicted RBP14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 FUNDC1Q8IVP5 155 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 SULF2Q8IWU5 870 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 DND1Q8IYX4 353 aaKnown RBP14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 CPSF7Q8N684 471 aaKnown RBP14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 GOLM1Q8NBJ4 401 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 OR56A1Q8NGH5 318 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 SFXN5Q8TD22 340 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 GRHL3Q8TE85 626 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 PIK3R3Q92569 461 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 SLC9A6Q92581 669 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 JADE3Q92613 823 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 VPS33AQ96AX1 596 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 CHMP6Q96FZ7 201 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 SGCZQ96LD1 299 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 CCDC115Q96NT0 180 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 ZNF385DQ9H6B1 395 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 ASF1BQ9NVP2 202 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 CCDC167Q9P0B6 97 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 BTNL2Q9UIR0 455 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 PCDHGB4Q9UN71 923 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 KLF13Q9Y2Y9 288 aaPredicted RBP14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 OR10H1Q9Y4A9 318 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 CHCHD2Q9Y6H1 151 aaPredicted RBP14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 SHANK1Q9Y566 2161 aa14.27□□□□□ -0.13
LYSMD2-204ENST00000560491 GXYLT2A0PJZ3 443 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PINLYPA6NC86 204 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 CAPN14A8MX76 684 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 NR5A2O00482 541 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PEX1O43933 1283 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 UGT2B11O75310 529 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 C1QCP02747 245 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 IL6P05231 212 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 LSP1P33241 339 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PIGAP37287 484 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 RFC3P40938 356 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 MAP3K8P41279 467 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PRIM2P49643 509 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 MEOX1P50221 254 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 RPS26P62854 115 aaKnown RBP14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 ZNHIT3Q15649 155 aaPredicted RBP14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 INAQ16352 499 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 DUSP5Q16690 384 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 BICRALQ6AI39 1079 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 FAM180AQ6UWF9 173 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 CDRT4Q8N9R6 151 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 SLC16A11Q8NCK7 471 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 GPR151Q8TDV0 419 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PAQR8Q8TEZ7 354 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 HOXB13Q92826 284 aaPredicted RBP14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 EFHD2Q96C19 240 aaPredicted RBP14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 PANX1Q96RD7 426 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 Q9N2J8 555 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 SERHLQ9NQF3 203 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 SACM1LQ9NTJ5 587 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 GPATCH2Q9NW75 528 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 KLHL14Q9P2G3 628 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 TRIM33Q9UPN9 1127 aa14.26□□□□□ -0.13
LYSMD2-204ENST00000560491 ASPDHA6ND91 283 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 PYCARD-AS1I3L0S3 204 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 TSPAN2O60636 221 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 REM1O75628 298 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 NKX2-2O95096 273 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 P04436 131 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 GSNP06396 782 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 IL12BP29460 328 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 RFX3P48380 749 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 DNASE1L1P49184 302 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 CASP9P55211 416 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 GNGT1P63211 74 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 RCAN2Q14206 197 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 AGKQ53H12 422 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 EXOSC6Q5RKV6 272 aaKnown RBP14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 SLC22A10Q63ZE4 541 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 BLOC1S3Q6QNY0 202 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 C6orf120Q7Z4R8 191 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 ZNF605Q86T29 641 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 FBXW8Q8N3Y1 598 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 BCORP1Q8N888 145 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 FAM98AQ8NCA5 519 aaKnown RBP14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 OR2M7Q8NG81 312 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 GOT1L1Q8NHS2 421 aaPredicted RBP14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 SPPL2AQ8TCT8 520 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 C10orf82Q8WW14 230 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 DIO2Q92813 273 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 HGDQ93099 445 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 MOAP1Q96BY2 351 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 RMND5BQ96G75 393 aaPredicted RBP14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 SLC35G5Q96KT7 338 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 COL21A1Q96P44 957 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 NODALQ96S42 347 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 ADOQ96SZ5 270 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 FAM107BQ9H098 131 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 SERHL2Q9H4I8 314 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 PROK2Q9HC23 129 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 SLC6A13Q9NSD5 602 aa14.25□□□□□ -0.13
LYSMD2-204ENST00000560491 CNOT11Q9UKZ1 510 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms