RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 GLOD5A6NK44 160 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 C2orf74A8MZ97 194 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FAM227AF5H4B4 570 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 M0R129 80 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RFXAPO00287 272 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 AP3D1O14617 1153 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MAGEB3O15480 346 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ZSCAN9O15535 394 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 PRKRAO75569 313 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 CYP7B1O75881 506 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OR5F1O95221 314 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RAB36O95755 333 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 EML2O95834 649 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TNFP01375 233 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 IGLV3-19P01714 112 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 GUSBP08236 651 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 CCNYL3P0C7X3 344 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 DBTP11182 482 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 NDUFV2P19404 249 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MAGP20916 626 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FUT4P22083 530 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 AK4P27144 223 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FEN1P39748 380 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ETV6P41212 452 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 STAT5AP42229 794 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RANBP1P43487 201 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RABIFP47224 123 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 GIPRP48546 466 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 BCAP31P51572 246 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 CLDN2P57739 230 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 EFNB1P98172 346 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF45Q02386 682 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MLLT11Q13015 90 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 C1DQ13901 141 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 GINS1Q14691 196 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF181Q2M3W8 571 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ALG11Q2TAA5 492 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TRIM16LQ309B1 348 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 INAVAQ3KP66 663 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ARHGAP11BQ3KRB8 267 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 C3orf38Q5JPI3 329 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FHL5Q5TD97 284 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FCRL6Q6DN72 434 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FBXO42Q6P3S6 717 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 KIAA1324Q6UXG2 1013 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 SLC36A4Q6YBV0 504 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FRRS1Q6ZNA5 592 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RNF44Q7L0R7 432 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ABI3BPQ7Z7G0 1075 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 IQCHQ86VS3 1027 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 COMTD1Q86VU5 262 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TRIM48Q8IWZ4 208 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FAM20CQ8IXL6 584 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 RBM12BQ8IXT5 1001 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 NLGN4XQ8N0W4 816 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OR2L13Q8N349 312 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 CLDN22Q8N7P3 220 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 NANOGP1Q8N7R0 232 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TCEANCQ8N8B7 351 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 KCT2Q8NC54 265 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OR9Q1Q8NGQ5 310 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OR9A2Q8NGT5 310 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OR52P1PQ8NH57 321 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 PIGXQ8TBF5 258 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 FAM174AQ8TBP5 190 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TEX47Q8TBZ9 253 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TMEM163Q8TC26 289 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 GPBAR1Q8TDU6 330 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ACOT11Q8WXI4 607 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ITPKCQ96DU7 683 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OTUB1Q96FW1 271 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 SLC35A4Q96G79 324 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 C16orf58Q96GQ5 468 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 SLC6A18Q96N87 628 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 OPALINQ96PE5 141 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 IL4I1Q96RQ9 567 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ZFYVE21Q9BQ24 234 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MACROD1Q9BQ69 325 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 WFDC6Q9BQY6 131 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 YIPF4Q9BSR8 244 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TSSK6Q9BXA6 273 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 GSDMCQ9BYG8 508 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ALOXE3Q9BYJ1 711 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 TMEM168Q9H0V1 697 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 SYNPO2LQ9H987 977 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 KRCC1Q9NPI7 259 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 POLE3Q9NRF9 147 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MED17Q9NVC6 651 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 DNAJC27Q9NZQ0 273 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 USP36Q9P275 1121 aaKnown RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 DAPK2Q9UIK4 370 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 MMP17Q9ULZ9 603 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 DAPP1Q9UN19 280 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 ZNF232Q9UNY5 417 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 C19orf53Q9UNZ5 99 aaPredicted RBP7.58□□□□□ -1.2
SMAD3-212ENST00000559937 UGT2A1Q9Y4X1 527 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 SLC22A7Q9Y694 548 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 KCNE3Q9Y6H6 103 aa7.58□□□□□ -1.2
SMAD3-212ENST00000559937 PIAS3Q9Y6X2 628 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms