RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SSR3Q9UNL2 185 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SLC17A4Q9Y2C5 497 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PCDHGA4Q9Y5G9 962 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 AP3D1O14617 1153 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 EMC8O43402 210 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PROM1O43490 865 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ADH1BP00325 375 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 APODP05090 189 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 MSL3P1P0C860 447 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 GNSP15586 552 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 AK4P27144 223 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SOX18P35713 384 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 RORCP51449 518 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SMSP52788 366 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 HNRNPA0Q13151 305 aaKnown RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 C1DQ13901 141 aaKnown RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TJAP1Q5JTD0 557 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TRIM69Q86WT6 500 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 Q8N9G6 341 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TEX47Q8TBZ9 253 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 PHOSPHO2Q8TCD6 241 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 COL26A1Q96A83 441 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ARMC5Q96C12 935 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF681Q96N22 645 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 OR2A14Q96R47 310 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 APOOQ9BUR5 198 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM74BQ9NUR3 256 aa9.42□□□□□ -0.9
LRRC28-216ENST00000559819 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 PRR19A6NJB7 356 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 UBXN7O94888 489 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 THY1P04216 161 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GDI1P31150 447 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 NR4A2P43354 598 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GPR4P46093 362 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CAV3P56539 151 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 PPP2CBP62714 309 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 PPP2CAP67775 309 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 PSPHP78330 225 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 LARS2Q15031 903 aaKnown RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 AGERQ15109 404 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TAB1Q15750 504 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF79Q15937 498 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 NDUFA9Q16795 377 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF730Q6ZMV8 503 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 RD3Q7Z3Z2 195 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 C7orf61Q8IZ16 206 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 MFSD9Q8NBP5 474 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 OR4Q3Q8NH05 313 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ZCCHC10Q8TBK6 192 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TMEM163Q8TC26 289 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GNPDA2Q8TDQ7 276 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 DIO2Q92813 273 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GIMAP5Q96F15 307 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SLC35A4Q96G79 324 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TM9SF2Q99805 663 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ARHGDIGQ99819 225 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ABCB9Q9NP78 766 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D29Q9UFV1 150 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CENPVL1A0A0U1RR11 272 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GPR89AB7ZAQ6 455 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CASC3O15234 703 aaKnown RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TSPAN19P0C672 248 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GPR89BP0CG08 455 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF888P0CJ79 500 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CMPK1P30085 196 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 AHRP35869 848 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 DEFA1P59665 94 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 DEFA3P59666 94 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 RPS21P63220 83 aaKnown RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 PRR5P85299 388 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 DUSP6Q16828 381 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 RNLSQ5VYX0 342 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 ZNF776Q68DI1 518 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SLC30A6Q6NXT4 461 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SLC27A4Q6P1M0 643 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 BHLHB9Q6PI77 547 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SLC36A4Q6YBV0 504 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TMPRSS11AQ6ZMR5 421 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 C16orf62Q7Z3J2 963 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 VN1R4Q7Z5H5 301 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 NRARPQ7Z6K4 114 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 IL17RDQ8NFM7 739 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 OR7G2Q8NG99 324 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CCL4L1Q8NHW4 92 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TRPV4Q9HBA0 871 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 C3orf14Q9HBI5 128 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 CD93Q9NPY3 652 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GIMAP4Q9NUV9 329 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 GDE1Q9NZC3 331 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SLC13A4Q9UKG4 626 aa9.41□□□□□ -0.9
LRRC28-216ENST00000559819 SPTBN5Q9NRC6 3674 aaKnown RBP9.41□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3DA0A087WVF3 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3IA0A087WXS9 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3EA0A087X179 549 aa9.4□□□□□ -0.9
LRRC28-216ENST00000559819 TBC1D3KA0A087X1G2 549 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms