RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RGNQ15493 299 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 DUSP5Q16690 384 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 LINC00303Q3SY05 128 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 COX20Q5RI15 118 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 BORAQ6PGQ7 559 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 DNAJC14Q6Y2X3 702 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 NET1Q7Z628 596 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF227Q86WZ6 799 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CALHM3Q86XJ0 350 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC5A8Q8N695 610 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 CHDHQ8NE62 594 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 FDCSPQ8NFU4 85 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC35A4Q96G79 324 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 NSL1Q96IY1 281 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 KAT8Q9H7Z6 458 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 SH2D2AQ9NP31 389 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 ABCD2Q9UBJ2 740 aa13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 YARS2Q9Y2Z4 477 aaKnown RBP13.68□□□□□ -0.22
SNRPA1-207ENST00000559309 ADAM10O14672 748 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 TSPAN2O60636 221 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 UBOX5O94941 541 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 KRT16P08779 473 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 MATN1P21941 496 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 ITGA3P26006 1051 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 SOAT1P35610 550 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 PIGAP37287 484 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 BNIP1Q12981 228 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 NFYCQ13952 458 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 ADRM1Q16186 407 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 MEP1AQ16819 746 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 CYP27C1Q4G0S4 372 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 B3GNTL1Q67FW5 361 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 C16orf47Q6ZP98 133 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 RNF130Q86XS8 419 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 HORMAD2Q8N7B1 307 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 TMEM125Q96AQ2 219 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 MAGED4Q96JG8 741 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC35G5Q96KT7 338 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF354BQ96LW1 612 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 OR7D2Q96RA2 312 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 LMF1Q96S06 567 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 RASL10BQ96S79 203 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 HOPXQ9BPY8 73 aaPredicted RBP13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC39A3Q9BRY0 314 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 C1orf21Q9H246 121 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 PCDHGB7Q9Y5F8 929 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 KCNE3Q9Y6H6 103 aa13.67□□□□□ -0.22
SNRPA1-207ENST00000559309 DUXAA6NLW8 204 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 AIM2O14862 343 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 ITGA10O75578 1167 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 OR2J2O76002 312 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 ANP32DO95626 131 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 FBXO45P0C2W1 286 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 PRKAG1P54619 331 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 RPS26P62854 115 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 GABPB1Q06547 395 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 MFAP5Q13361 173 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 CAPRIN1Q14444 709 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 FXNQ16595 210 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF791Q3KP31 576 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 MMEL1Q495T6 779 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 SPDYE7PQ495Y7 208 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 TMEM81Q6P7N7 255 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 WDR53Q7Z5U6 358 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC15A3Q8IY34 581 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 SIRT6Q8N6T7 355 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 OR4N2Q8NGD1 307 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 OR5D16Q8NGK9 328 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 HAS2Q92819 552 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC7A6OSQ96CW6 309 aaPredicted RBP13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 SAP130Q9H0E3 1048 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 OR51I1Q9H343 314 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 CDCP1Q9H5V8 836 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 TMEM38AQ9H6F2 299 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 CMTM6Q9NX76 183 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
SNRPA1-207ENST00000559309 C15orf38-AP3S2A0A0A6YYH1 394 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 GXYLT2A0PJZ3 443 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 EIF4E1BA6NMX2 242 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 NPIPB9F8W1W9 429 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 WWP2O00308 870 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 KCNK2O95069 426 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZIC2O95409 532 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 AGR2O95994 175 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 IGKV1D-16P01601 117 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ABCD3P28288 659 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 CHI3L1P36222 383 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 KHKP50053 298 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 CCL11P51671 97 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 NR0B1P51843 470 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 MNAT1P51948 309 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF155Q12901 538 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 NTRK2Q16620 822 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ARHGAP11BQ3KRB8 267 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms