RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF248Q8NDW4 579 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 BHLHE23Q8NDY6 225 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 STXBP6Q8NFX7 210 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 OR10G7Q8NGN6 311 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 OR13C2Q8NGS9 318 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 OR2T6Q8NHC8 308 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SPPL2AQ8TCT8 520 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 RAET1EQ8TD07 263 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 RNF139Q8WU17 664 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 OSTF1Q92882 214 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ART4Q93070 314 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 MYLPFQ96A32 169 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 VOPP1Q96AW1 172 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SLC25A36Q96CQ1 311 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FBXO17Q96EF6 278 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ATXN7L3BQ96GX2 97 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 RPRD1AQ96P16 312 aaPredicted RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 AGAP4Q96P64 663 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 RCHY1Q96PM5 261 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 SECISBP2Q96T21 854 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PLIN2Q99541 437 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 CABLES2Q9BTV7 478 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 GON7Q9BXV9 100 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PNNQ9H307 717 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 RHOJQ9H4E5 214 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NT5DC2Q9H857 520 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ELOVL3Q9HB03 270 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 IL1RL2Q9HB29 575 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 IL1RAPQ9NPH3 570 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ESM1Q9NQ30 184 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PLCXD1Q9NUJ7 323 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NMRK1Q9NWW6 199 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 C2orf42Q9NWW7 574 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 UTP6Q9NYH9 597 aaKnown RBP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 EMCNQ9ULC0 261 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NIP7Q9Y221 180 aaKnown RBP eCLIP1.96□□□□□ -2.1
GABPB1-209ENST00000559100 DHRS7Q9Y394 339 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 FBXO7Q9Y3I1 522 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 NAALAD2Q9Y3Q0 740 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 LRP12Q9Y561 859 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 ASB3Q9Y575 518 aa1.96□□□□□ -2.1
GABPB1-209ENST00000559100 PTCH1Q13635 1447 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PTPRUQ92729 1446 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 LOC105371242A0A075B767 164 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NPIPA5A0A0B4J1W7 369 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PPIAL4CA0A0B4J2A2 164 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 TRGV8A0A0C4DH27 118 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MEIOCA2RUB1 952 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MBLAC1A4D2B0 266 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 TRABD2BA6NFA1 517 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RNF212BA8MTL3 300 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NPIPA5E9PKD4 350 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 H0Y8G0 127 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 CXCL11O14625 94 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 IMPA2O14732 288 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PPIHO43447 177 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 DUX1O43812 170 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 B4GALT2O60909 372 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 KHDRBS3O75525 346 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF821O75541 412 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 STX11O75558 287 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SURF6O75683 361 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SCGNO76038 276 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NUDT14O95848 222 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 FCGR3AP08637 254 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 IGFBP1P08833 259 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PATE4P0C8F1 98 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 HSMCR30P0CW71 290 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PPIAL4GP0DN37 164 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MYOGP15173 224 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF44P15621 663 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 H2AFXP16104 143 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 GNB3P16520 340 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 UCP1P25874 307 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 OXTRP30559 389 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MAT2AP31153 395 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 GNPDA1P46926 289 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ACADVLP49748 655 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PLA2G16P53816 162 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 VCPP55072 806 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 DLX5P56178 289 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ATP5IP56385 69 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ACTR3P61158 418 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NTHL1P78549 312 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NCBP1Q09161 790 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RIGQ13278 110 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 CUL2Q13617 745 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM187Q14656 261 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RAB35Q15286 201 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 CDKN3Q16667 212 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 UPP1Q16831 310 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 C10orf120Q5SQS8 335 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SPATA46Q5T0L3 261 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SEL1L3Q68CR1 1132 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM225Q6GV28 225 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PRR5LQ6MZQ0 368 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN25Q6NSZ9 544 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RHBDD2Q6NTF9 364 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ARHGAP11AQ6P4F7 1023 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms