RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GOT1L1Q8NHS2 421 aaPredicted RBP10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLC22A8Q8TCC7 542 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 CPT1CQ8TCG5 803 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SPPL2AQ8TCT8 520 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 PIK3R3Q92569 461 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 TMBIM1Q969X1 311 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 VPS33AQ96AX1 596 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLC35A4Q96G79 324 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 SLX1AQ9BQ83 275 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 YIPF4Q9BSR8 244 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 EQTNQ9NQ60 294 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 ATAD3AQ9NVI7 634 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 FBXO34Q9NWN3 711 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 HPF1Q9NWY4 346 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 ABI3Q9P2A4 366 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 BTNL2Q9UIR0 455 aa10.51□□□□□ -0.73
SNX1-204ENST00000559061 PCNX3Q9H6A9 2034 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 A0A0G2JND7 137 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 PRSS51A0A1B0GVH4 220 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 PRAMEF27A3QJZ7 478 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 ACOX3O15254 700 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 PPM1BO75688 479 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 GLSO94925 669 aaPredicted RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 HMGN2P05204 90 aaKnown RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 VIMP08670 466 aaKnown RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 S100A3P33764 101 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 GPC1P35052 558 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 DNASE1L1P49184 302 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 MEOX1P50221 254 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 ATP4BP51164 291 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 MVDP53602 400 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 GAS1P54826 345 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 FOXK1P85037 733 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 FUT5Q11128 374 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 LASP1Q14847 261 aaKnown RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 RPS6KA2Q15349 733 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 INAQ16352 499 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 DPY19L1Q2PZI1 675 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 TIGD2Q4W5G0 525 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 PRAMEF20Q5VT98 475 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 SLC44A2Q8IWA5 706 aaPredicted RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 MSRB3Q8IXL7 192 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 SLC34A3Q8N130 599 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 MIER2Q8N344 545 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 FBXW8Q8N3Y1 598 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 BCORP1Q8N888 145 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 ZFP62Q8NB50 900 aaPredicted RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 OR2M7Q8NG81 312 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 SFXN5Q8TD22 340 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 HSPBAP1Q96EW2 488 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 ZCCHC3Q9NUD5 404 aaKnown RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 FAM120CQ9NX05 1096 aaKnown RBP10.5□□□□□ -0.73
SNX1-204ENST00000559061 TAS2R9Q9NYW1 312 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 CFL2Q9Y281 166 aa10.5□□□□□ -0.73
SNX1-204ENST00000559061 FAM234BA2RU67 622 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 TTLL8A6PVC2 850 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 ZNHIT1O43257 154 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 PEX1O43933 1283 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 TRIM3O75382 744 aaPredicted RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 GSNP06396 782 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CYP4B1P13584 511 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CD46P15529 392 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 DRD4P21917 467 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 LSP1P33241 339 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 UQCRFS1P47985 274 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CCT3P49368 545 aaKnown RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 POLR2JP52435 117 aaKnown RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 PRKAG1P54619 331 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CASP9P55211 416 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 DCAF7P61962 342 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 PLCXD2Q0VAA5 305 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 SQLEQ14534 574 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 MAPKAPK3Q16644 382 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 HLA-DQA1Q5Y7H0 255 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 SAXO2Q658L1 398 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CDC73Q6P1J9 531 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 SLC2A7Q6PXP3 512 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 BLOC1S3Q6QNY0 202 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 APOOLQ6UXV4 268 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 GK5Q6ZS86 529 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 OLIG3Q7RTU3 272 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 FGD2Q7Z6J4 655 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 GALNT10Q86SR1 603 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 TAGAPQ8N103 731 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 C10orf111Q8N326 155 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 NATD1Q8N6N6 113 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 GLB1L3Q8NCI6 653 aaPredicted RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 OR5D16Q8NGK9 328 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 OR4A15Q8NGL6 344 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 GTF2H4Q92759 462 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 CDS1Q92903 461 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 EFHD2Q96C19 240 aaPredicted RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 SGCZQ96LD1 299 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 C5orf34Q96MH7 638 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 OR52E6Q96RD3 313 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 PRPF18Q99633 342 aaKnown RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 SIKE1Q9BRV8 207 aa10.49□□□□□ -0.73
SNX1-204ENST00000559061 TSPAN10Q9H1Z9 355 aaPredicted RBP10.49□□□□□ -0.73
SNX1-204ENST00000559061 NEUROD4Q9HD90 331 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms