RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SGCD	Q92629	289 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	POP5	Q969H6	163 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	UBE2F	Q969M7	185 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PPP1R14B	Q96C90	147 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TCTN2	Q96GX1	697 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ELF4	Q99607	663 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRR14	Q9BWN1	585 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	REEP1	Q9H902	201 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ERVMER34-1	Q9H9K5	563 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRMT8	Q9NR22	394 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	THSD1	Q9NS62	852 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SEMA3G	Q9NS98	782 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PNPLA3	Q9NST1	481 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	FBXO34	Q9NWN3	711 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	MS4A12	Q9NXJ0	267 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	IFT80	Q9P2H3	777 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	P2RX2	Q9UBL9	471 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	EPHA6	Q9UF33	1036 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	BAG5	Q9UL15	447 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PSME2	Q9UL46	239 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PCDHGB3	Q9Y5G1	929 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ENPP4	Q9Y6X5	453 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CCDC163	A0A0D9SF12	145 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LY6G6E	A0A0G2JKS1	128 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CENPVL1	A0A0U1RR11	272 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LOC100130705	A0A1B0GUX0	176 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HYKK	A2RU49	373 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TLCD2	A6NGC4	264 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	RHPN2P1	A8MT19	583 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		A8MU76	341 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PATE3	B3GLJ2	98 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	C5orf58	C9J3I9	102 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		E9PQ18	207 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602		M0R3H8	397 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HRK	O00198	91 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TNFRSF11B	O00300	401 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC16A6	O15403	523 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	NUDT21	O43809	227 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SRPX2	O60687	465 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TPST2	O60704	377 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZBTB11	O95625	1053 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPR75	O95800	540 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ATP1B1	P05026	303 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ACP2	P11117	423 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CYP4B1	P13584	511 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	IL7R	P16871	459 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HOXB6	P17509	224 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CD53	P19397	219 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	S1PR1	P21453	382 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	AGXT	P21549	392 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CD1C	P29017	333 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PPP2R1B	P30154	601 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TLX1	P31314	330 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	RXRG	P48443	463 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	KHK	P50053	298 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	HMGA2	P52926	109 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PDX1	P52945	283 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CDH12	P55289	794 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	RAB38	P57729	211 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ISL1	P61371	349 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	IL1RL1	Q01638	556 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SPIB	Q01892	262 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CD47	Q08722	323 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	DUSP8	Q13202	625 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LSAMP	Q13449	338 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	RAPSN	Q13702	412 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	DUSP5	Q16690	384 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	MEP1A	Q16819	746 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	EXOC3L2	Q2M3D2	409 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PLK5	Q496M5	336 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	GPAT3	Q53EU6	434 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SNAP47	Q5SQN1	464 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CCNJ	Q5T5M9	372 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LYSMD4	Q5XG99	296 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	MFSD12	Q6NUT3	480 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	FAHD1	Q6P587	224 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TTC33	Q6PID6	262 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	NANOGNB	Q7Z5D8	188 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	WDR5B	Q86VZ2	330 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	VRK2	Q86Y07	508 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CCDC71	Q8IV32	467 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TMEM151B	Q8IW70	566 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	LGI4	Q8N135	537 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC5A8	Q8N695	610 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF655	Q8N720	491 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	AMER2	Q8N7J2	671 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PIK3C3	Q8NEB9	887 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRSS33	Q8NF86	280 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR9Q2	Q8NGE9	314 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR56A1	Q8NGH5	318 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	GEMIN6	Q8WXD5	167 aa	Known RBP	4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CDS1	Q92903	461 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	TMIGD2	Q96BF3	282 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	SDCCAG3	Q96C92	435 aa		4.57	□□□□□ -1.68
IDH3A-208	ENST00000558602	CTHRC1	Q96CG8	243 aa		4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms