RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 AIF1LQ9BQI0 150 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 MRI1Q9BV20 369 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 TRIM54Q9BYV2 358 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 OR8D2Q9GZM6 311 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 KLHL31Q9H511 634 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 PLEKHF2Q9H8W4 249 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 ARL15Q9NXU5 204 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 MOCS1Q9NZB8 636 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 SPRR3Q9UBC9 169 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 ZNF629Q9UEG4 869 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-211ENST00000558440 BOKQ9UMX3 212 aaPredicted RBP5.52□□□□□ -1.53
ZEB1-211ENST00000558440 MED16Q9Y2X0 877 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 PCDHGB3Q9Y5G1 929 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 MAD1L1Q9Y6D9 718 aa5.52□□□□□ -1.53
ZEB1-211ENST00000558440 C15orf38-AP3S2A0A0A6YYH1 394 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 MAGEB16A2A368 324 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 EEF1E1-BLOC1S5C9J1V9 151 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 H7C1Q1 480 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 EEF1E1O43324 174 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SMPD2O60906 423 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SERPINA6P08185 405 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 ELANEP08246 267 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SMIM10L1P0DMW3 83 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CCL3P10147 92 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CD53P19397 219 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TNNI3P19429 210 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CEACAM8P31997 349 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TIMP3P35625 211 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CLK3P49761 638 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TERF1P54274 439 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 AP1S2P56377 157 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 RAB38P57729 211 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 STXBP1P61764 594 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 BTN3A2P78410 334 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 REEP5Q00765 189 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SORDQ00796 357 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SRSF2Q01130 221 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 FOXO1Q12778 655 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TBL3Q12788 808 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 KIF5AQ12840 1032 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 STX4Q12846 297 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 RCN2Q14257 317 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SF3B4Q15427 424 aaKnown RBP eCLIP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SIX1Q15475 284 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 ACSF3Q4G176 576 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CLNKQ7Z7G1 428 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 ADGRG3Q86Y34 549 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 LACC1Q8IV20 430 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 ZNF595Q8IYB9 648 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 FAM47BQ8NA70 645 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 NAXEQ8NCW5 288 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 MORN4Q8NDC4 146 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TNIP2Q8NFZ5 429 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 OR56A3Q8NH54 315 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 LINC01560Q8TB33 94 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 CCT6BQ92526 530 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 NEIL2Q969S2 332 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 HSPBAP1Q96EW2 488 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 LINGO1Q96FE5 620 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SMIM10Q96HG1 83 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TSNARE1Q96NA8 513 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 RUNDC3BQ96NL0 473 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 OR4K3Q96R72 315 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 NPLQ9BXD5 320 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TRIM5Q9C035 493 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 REXO4Q9GZR2 422 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SPNS1Q9H2V7 528 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 PELI2Q9HAT8 420 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 SEMA4BQ9NPR2 832 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 C20orf96Q9NUD7 363 aaPredicted RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TAS2R13Q9NYV9 303 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 COPS7AQ9UBW8 275 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 TMA7Q9Y2S6 64 aaKnown RBP5.51□□□□□ -1.53
ZEB1-211ENST00000558440 ATG4BQ9Y4P1 393 aa5.51□□□□□ -1.53
ZEB1-211ENST00000558440 RAI1Q7Z5J4 1906 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-211ENST00000558440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.538e-10■■■■□ 20.2
ZEB1-211ENST00000558440 A0A0G2JN53 185 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 TCRBV7S3A2A0A539 114 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 SDR42E2A6NKP2 422 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 C17orf105B2RV13 164 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 C4orf51C9J302 202 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 INAFM1C9JVW0 142 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 CASKO14936 926 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 ERI3O43414 337 aaKnown RBP5.5□□□□□ -1.53
ZEB1-211ENST00000558440 HAUS5O94927 633 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 GUCA1CO95843 209 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 EPPINO95925 133 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 HRGP04196 525 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 RFPL3SP0C7P2 107 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 RAP2AP10114 183 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 GDF1P27539 372 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 HPDP32754 393 aaPredicted RBP5.5□□□□□ -1.53
ZEB1-211ENST00000558440 OPRM1P35372 400 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 PIGAP37287 484 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 CPA2P48052 419 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 TRPC1P48995 793 aa5.5□□□□□ -1.53
ZEB1-211ENST00000558440 HNRNPFP52597 415 aaKnown RBP5.5□□□□□ -1.53
ZEB1-211ENST00000558440 WNT3P56703 355 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms