RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 ANKRD26P1Q6NSI1 321 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 NOXRED1Q6NXP6 359 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 LARP4Q71RC2 724 aaKnown RBP eCLIP10.87□□□□□ -0.67
HERC1-202ENST00000558324 NAXEQ8NCW5 288 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 TNIP2Q8NFZ5 429 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 OR14L1PQ8NHC6 308 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 ABTB1Q969K4 478 aaPredicted RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 TMCO6Q96DC7 493 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 ERP27Q96DN0 273 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 FAM111AQ96PZ2 611 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 TRIB1Q96RU8 372 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 TREX2Q9BQ50 279 aaPredicted RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 GATA5Q9BWX5 397 aaPredicted RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 UGT2B28Q9BY64 529 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 MCCC2Q9HCC0 563 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 DDX18Q9NVP1 670 aaKnown RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 TAS2R9Q9NYW1 312 aa10.87□□□□□ -0.67
HERC1-202ENST00000558324 EXO1Q9UQ84 846 aaKnown RBP10.87□□□□□ -0.67
HERC1-202ENST00000558324 PHF3Q92576 2039 aaKnown RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 LRBAP50851 2863 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 C17orf51A8MQB3 221 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 AHRRA9YTQ3 701 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 TMEM233B4DJY2 109 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SLC28A1O00337 649 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 AZIN1O14977 448 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 RGS14O43566 566 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SCO2O43819 266 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 PLOD3O60568 738 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 TSPAN2O60636 221 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 TRIM13O60858 407 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 COQ9O75208 318 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 CHRNGP07510 517 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 LINC00032P0C843 101 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 BMP5P22003 454 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 UQCRC1P31930 480 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 GCKP35557 465 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 RFX3P48380 749 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 RPL38P63173 70 aaKnown RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 SLC18A2Q05940 514 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SNTA1Q13424 505 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SLC25A35Q3KQZ1 300 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 VASNQ6EMK4 673 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 OR5M10Q6IEU7 315 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 TMEM81Q6P7N7 255 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 TMEM200AQ86VY9 491 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 LACC1Q8IV20 430 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 DDIASQ8IXT1 998 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 DMRTC2Q8IXT2 367 aaPredicted RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 PM20D2Q8IYS1 436 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 CLYBLQ8N0X4 340 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 WDSUB1Q8N9V3 476 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 RELL2Q8NC24 303 aaPredicted RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 OR2T11Q8NH01 316 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 CLHC1Q8NHS4 586 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 FAM76AQ8TAV0 307 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC1-202ENST00000558324 AGR3Q8TD06 166 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC1-202ENST00000558324 NTNG2Q96CW9 530 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SLC35A4Q96G79 324 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 WDYHV1Q96HA8 205 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 ZNF559Q9BR84 538 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 MECRQ9BV79 373 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 STMN4Q9H169 189 aaPredicted RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 GLIPR2Q9H4G4 154 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 LRTM1Q9HBL6 345 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 C1orf109Q9NX04 203 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 SLC17A7Q9P2U7 560 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC1-202ENST00000558324 FBXL2Q9UKC9 423 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 CCL27Q9Y4X3 112 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 PCDHGB3Q9Y5G1 929 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 WIF1Q9Y5W5 379 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 V9GYY5 206 aaPredicted RBP10.86□□□□□ -0.67
HERC1-202ENST00000558324 DNAJC13O75165 2243 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 ABCA12Q86UK0 2595 aa10.86□□□□□ -0.67
HERC1-202ENST00000558324 NINQ8N4C6 2090 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 PKDREJQ9NTG1 2253 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 HSPB2A8KAH6 182 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 H0Y3Z8 333 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 UPK1AO00322 258 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 AKAP10O43572 662 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 ABCB7O75027 752 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 EPPINO95925 133 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 CHEK2O96017 543 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 NUDT17P0C025 328 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 CYP4B1P13584 511 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 ALDH3A1P30838 453 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 AGFG1P52594 562 aaKnown RBP10.85□□□□□ -0.67
HERC1-202ENST00000558324 DLX5P56178 289 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 PSG6Q00889 435 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 SRYQ05066 204 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 HSPB3Q12988 150 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 STX5Q13190 355 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 EFR3AQ14156 821 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 HSPB2Q16082 182 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 GALNTL6Q49A17 601 aa10.85□□□□□ -0.67
HERC1-202ENST00000558324 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms