RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 B4GALT1P15291 398 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ARF4P18085 180 aaPredicted RBP2.42□□□□□ -2.02
SPG11-206ENST00000558093 DNAJB1P25685 340 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 UCP1P25874 307 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CA8P35219 290 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 EPS15P42566 896 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 RABIFP47224 123 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CXCL6P80162 114 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CCDC173Q0VFZ6 552 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MXD4Q14582 209 aaPredicted RBP2.42□□□□□ -2.02
SPG11-206ENST00000558093 KRT31Q15323 416 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 STXBP2Q15833 593 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 SMU1Q2TAY7 513 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 C2orf76Q3KRA6 126 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CCDC152Q4G0S7 254 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MPPE1Q53F39 396 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 METTL11BQ5VVY1 283 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 STEAP1BQ6NZ63 245 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 C2orf66Q6UXQ4 117 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 GCNT7Q6ZNI0 430 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MOB2Q70IA6 237 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CCDC80Q76M96 950 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CENPQQ7L2Z9 268 aaPredicted RBP2.42□□□□□ -2.02
SPG11-206ENST00000558093 MTERF4Q7Z6M4 381 aaKnown RBP2.42□□□□□ -2.02
SPG11-206ENST00000558093 PEX5LQ8IYB4 626 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 C10orf53Q8N6V4 93 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 LINC00469Q8N7U9 141 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 GMCL1P1Q8NEA9 526 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 UBTD2Q8WUN7 234 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 GLYATL1Q969I3 302 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 FAM46BQ96A09 425 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 BIRC7Q96CA5 298 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MAGEB18Q96M61 343 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 TXN2Q99757 166 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 DDX50Q9BQ39 737 aaKnown RBP2.42□□□□□ -2.02
SPG11-206ENST00000558093 SPXQ9BT56 116 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ST6GALNAC5Q9BVH7 336 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 FUNDC2Q9BWH2 189 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CAPS2Q9BXY5 557 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 FUT8Q9BYC5 575 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ZNF350Q9GZX5 532 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CLSTN2Q9H4D0 955 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 TM9SF3Q9HD45 589 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 MID1IP1Q9NPA3 183 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 GLRX2Q9NS18 164 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 QPCTLQ9NXS2 382 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 VNN3Q9NY84 501 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 CHMP5Q9NZZ3 219 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 ADAM22Q9P0K1 906 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 IL17CQ9P0M4 197 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 HMG20BQ9P0W2 317 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 EXTL2Q9UBQ6 330 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 FETUBQ9UGM5 382 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 AURKCQ9UQB9 309 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 TTC41PQ6P2S7 1318 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 TTC21BQ7Z4L5 1316 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 WDR19Q8NEZ3 1342 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 KIF16BQ96L93 1317 aa2.42□□□□□ -2.02
SPG11-206ENST00000558093 A0A0A6YYC8 382 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 CTAGE15A4D2H0 777 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 LRRIQ4A6NIV6 560 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 YJEFN3A6XGL0 299 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 I3L1I5 382 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 TSPAN2O60636 221 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 BCAS2O75934 225 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 OLFM2O95897 454 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 NPPAP01160 153 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 TPM1P09493 284 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CAMLGP49069 296 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 NT5C2P49902 561 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 HLCSP50747 726 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 STARD6P59095 220 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 ERVPABLB-1P60509 514 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 ACTR1AP61163 376 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CTAG1AP78358 180 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 PAX2Q02962 417 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 GABPB1Q06547 395 aaPredicted RBP2.41□□□□□ -2.02
SPG11-206ENST00000558093 BNIP1Q12981 228 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 RPA4Q13156 261 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 SNX1Q13596 522 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 TGIF1Q15583 401 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 INAQ16352 499 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 STX1AQ16623 288 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 TYSND1Q2T9J0 566 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 FUT11Q495W5 492 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CCDC40Q4G0X9 1142 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 HSP90AA5PQ58FG0 334 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 AADACL4Q5VUY2 407 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 KCTD11Q693B1 232 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 SLC25A24Q6NUK1 477 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 ZYG11AQ6WRX3 759 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 LINC00696Q6ZRV3 163 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 Q6ZVH6 145 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 ASRGL1Q7L266 308 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 KCTD9Q7L273 389 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CTAGE6Q86UF2 777 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 LUZP1Q86V48 1076 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 CDH26Q8IXH8 852 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 SLC7A5P1Q8MH63 180 aa2.41□□□□□ -2.02
SPG11-206ENST00000558093 LINC00518Q8N0U6 118 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms