RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PPM1BO75688 479 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 P04436 131 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 HMGN2P05204 90 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 ACP2P11117 423 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 GABRA3P34903 492 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 PIGAP37287 484 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 ZFP36L2P47974 494 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 RFX3P48380 749 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 TMED10P49755 219 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 POLR2JP52435 117 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 GAB1Q13480 694 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 SQLEQ14534 574 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 LASP1Q14847 261 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 INAQ16352 499 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 SLC22A10Q63ZE4 541 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 BICRALQ6AI39 1079 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 DND1Q8IYX4 353 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 GOLM1Q8NBJ4 401 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 VPS37AQ8NEZ2 397 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 OR56A1Q8NGH5 318 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 SFXN5Q8TD22 340 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 GPR151Q8TDV0 419 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 STON2Q8WXE9 905 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 PIK3R3Q92569 461 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 VPS33AQ96AX1 596 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 EFHD2Q96C19 240 aaPredicted RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 CCDC115Q96NT0 180 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 INPP5KQ9BT40 448 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 LMF2Q9BU23 707 aaKnown RBP13.19□□□□□ -0.3
USP3-205ENST00000557884 SH2D2AQ9NP31 389 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
USP3-205ENST00000557884 FAM234BA2RU67 622 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 NR5A2O00482 541 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 TP53I11O14683 189 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 UGT2B11O75310 529 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 GSNP06396 782 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CD1EP15812 388 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 IL12BP29460 328 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 KRT20P35900 424 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 DNASE1L1P49184 302 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 PRIM2P49643 509 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 ARFIP2P53365 341 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CASP9P55211 416 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 RPS26P62854 115 aaKnown RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 DUSP5Q16690 384 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 AGKQ53H12 422 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 DNAJC14Q6Y2X3 702 aaPredicted RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 GALNT10Q86SR1 603 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 BCORP1Q8N888 145 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CDRT4Q8N9R6 151 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 FAM98AQ8NCA5 519 aaKnown RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 SLC16A11Q8NCK7 471 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 PAQR8Q8TEZ7 354 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 DIO2Q92813 273 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 RMND5BQ96G75 393 aaPredicted RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 FRMD6Q96NE9 622 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 COL21A1Q96P44 957 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 FAM107BQ9H098 131 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 TSPAN10Q9H1Z9 355 aaPredicted RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 Q9N2J8 555 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 OLAHQ9NV23 265 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 GPATCH2Q9NW75 528 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CCDC167Q9P0B6 97 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 BTNL2Q9UIR0 455 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CNOT11Q9UKZ1 510 aaKnown RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 CBLCQ9ULV8 474 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 TRIM33Q9UPN9 1127 aa13.18□□□□□ -0.3
USP3-205ENST00000557884 CHCHD2Q9Y6H1 151 aaPredicted RBP13.18□□□□□ -0.3
USP3-205ENST00000557884 CCDC154A6NI56 674 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 KLRC4-KLRK1H3BQV0 150 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 TSPAN2O60636 221 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 IL6P05231 212 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 ALOX5P09917 674 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 PLA2G2AP14555 144 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 NAGAP17050 411 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 CNR1P21554 472 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 CDKN2CP42773 168 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
USP3-205ENST00000557884 ATP4BP51164 291 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 SEC24CP53992 1094 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 KCNJ2P63252 427 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 PLGLB1Q02325 96 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 DECR1Q16698 335 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 VPS26BQ4G0F5 336 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 CYP27C1Q4G0S4 372 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 RNFT1Q5M7Z0 435 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 ZNF621Q6ZSS3 439 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 C6orf120Q7Z4R8 191 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 FUNDC1Q8IVP5 155 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 FBXW8Q8N3Y1 598 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 OR2M7Q8NG81 312 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 SPPL2AQ8TCT8 520 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 HGDQ93099 445 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 MIB2Q96AX9 1013 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 MOAP1Q96BY2 351 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 SLC35G5Q96KT7 338 aa13.17□□□□□ -0.3
USP3-205ENST00000557884 PANX1Q96RD7 426 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms