RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 GPR55Q9Y2T6 319 aaPredicted RBP11.25□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF175Q9Y473 711 aa11.25□□□□□ -0.61
PSEN1-221ENST00000557293 EFCAB8A8MWE9 144 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 H0YIV9 168 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 TP73O15350 636 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 NME6O75414 186 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-221ENST00000557293 REM1O75628 298 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 MTHFD2P13995 350 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 PTMSP20962 102 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 GRK2P25098 689 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 THBS2P35442 1172 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 SLC6A8P48029 635 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 NEK2P51955 445 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 ATP6V0D1P61421 351 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF844Q08AG5 666 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 PON3Q15166 354 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 PGGHGQ32M88 737 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 DNAJC14Q6Y2X3 702 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-221ENST00000557293 CHMP1BQ7LBR1 199 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.24□□□□□ -0.61
PSEN1-221ENST00000557293 ANKMY2Q8IV38 441 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 TRIM58Q8NG06 486 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 WDR20Q8TBZ3 569 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 SMAP2Q8WU79 429 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-221ENST00000557293 UBTD2Q8WUN7 234 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 TMCO6Q96DC7 493 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 LRRC39Q96DD0 335 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 ATOH8Q96SQ7 321 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 CENPKQ9BS16 269 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 DSN1Q9H410 356 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 TMEM160Q9NX00 188 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 BCAP29Q9UHQ4 241 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 DKKL1Q9UK85 242 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 CDC42EP3Q9UKI2 254 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 PLLPQ9Y342 182 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 PCDHGA11Q9Y5H2 935 aa11.24□□□□□ -0.61
PSEN1-221ENST00000557293 MAGED1Q9Y5V3 778 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-221ENST00000557293 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CXorf49A8MYA2 514 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 HAX1O00165 279 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 ATP1B1P05026 303 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CT45A8P0DMV1 189 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CT45A9P0DMV2 189 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 FNTAP49354 379 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 DSCR4P56555 118 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 GPX6P59796 221 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 FGFBP1Q14512 234 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 FASTKD3Q14CZ7 662 aaKnown RBP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CTU2Q2VPK5 515 aaKnown RBP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CT45A2Q5DJT8 189 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 LIPJQ5W064 366 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 METTL25Q8N6Q8 603 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 TEX9Q8N6V9 391 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 ADCY4Q8NFM4 1077 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OR2M3Q8NG83 312 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OR10H5Q8NGA6 315 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OR5M1Q8NGP8 315 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 EXT2Q93063 718 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 C11orf24Q96F05 449 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-221ENST00000557293 PBKQ96KB5 322 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 ADOQ96SZ5 270 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 LRRC1Q9BTT6 524 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OR10A4Q9H209 315 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OPTCQ9UBM4 332 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 CFL2Q9Y281 166 aa11.23□□□□□ -0.61
PSEN1-221ENST00000557293 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 UBXN8O00124 270 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 FOXE1O00358 373 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 PSMB1P20618 241 aaKnown RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 FEN1P39748 380 aaKnown RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 PIK3CGP48736 1102 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 EEFSECP57772 596 aaKnown RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 LTB4RQ15722 352 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ZKSCAN8Q15776 578 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 TMEM249Q2WGJ8 235 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 SLC48A1Q6P1K1 146 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 SEZ6L2Q6UXD5 910 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 NUDT13Q86X67 352 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ARIH2OSQ8N7S6 290 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 OR52R1Q8NGF1 315 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 OR6K3Q8NGY3 331 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 GRK7Q8WTQ7 553 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 FBXW5Q969U6 566 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ZNF681Q96N22 645 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 TRAF4Q9BUZ4 470 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-221ENST00000557293 BEX2Q9BXY8 128 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 BRINP2Q9C0B6 783 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ACTR6Q9GZN1 396 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ALG9Q9H6U8 611 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ANKRA2Q9H9E1 313 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 NUDT4Q9NZJ9 180 aa11.22□□□□□ -0.61
PSEN1-221ENST00000557293 ASIC3Q9UHC3 531 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms