RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ANKRD9Q96BM1 317 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PGM2Q96G03 612 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 JSRP1Q96MG2 331 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 FAM111AQ96PZ2 611 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 UGT2B28Q9BY64 529 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF696Q9H7X3 374 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ADAP2Q9NPF8 381 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 WWOXQ9NZC7 414 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 ANAPC5Q9UJX4 755 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 SLC6A5Q9Y345 797 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 WIF1Q9Y5W5 379 aa4.24□□□□□ -1.73
SCFD1-223ENST00000557076 CHCHD2Q9Y6H1 151 aaPredicted RBP4.24□□□□□ -1.73
SCFD1-223ENST00000557076 MALRD1Q5VYJ5 2156 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 IGHV4-30-2A0A087WSY4 118 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 A0A1W2PNV4 684 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 FAM234BA2RU67 622 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 TMEM89A2RUT3 159 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 URADA6NGE7 173 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 H3BMM5 538 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 APOC4-APOC2K7ER74 178 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 UBFD1O14562 309 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CD3EAPO15446 510 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PJA2O43164 708 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZBTB14O43829 449 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CTNSO60931 367 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 NDUFS3O75489 264 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF189O75820 626 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PLAUP00749 431 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CGAP01215 116 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CD8AP01732 235 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 APOC2P02655 101 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 SERPING1P05155 500 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 POU2F1P14859 743 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 NPPBP16860 134 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 HNF1AP20823 631 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 TBXA2RP21731 343 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ADRA1DP25100 572 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CTNNA2P26232 953 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 GDF1P27539 372 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 SERPINB3P29508 390 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PPP2R1BP30154 601 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 AHRP35869 848 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CPOXP36551 454 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 MANFP55145 182 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 OLR1P78380 273 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 RGS1Q08116 209 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ASPHQ12797 758 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 SEMA3AQ14563 771 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 EFTUD2Q15029 972 aaKnown RBP eCLIP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 KLHL38Q2WGJ6 581 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 TSTD2Q5T7W7 516 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PLXDC2Q6UX71 529 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CYHR1Q6ZMK1 362 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 FRMD7Q6ZUT3 714 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 BBS12Q6ZW61 710 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 LINC00523Q86TU6 105 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF595Q8IYB9 648 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 MPP5Q8N3R9 675 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 TC2NQ8N9U0 490 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PPFIBP2Q8ND30 876 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 C7orf57Q8NEG2 295 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 OR14A16Q8NHC5 309 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 LILRB1Q8NHL6 650 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 NT5CQ8TCD5 201 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PROX1Q92786 737 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 C11orf24Q96F05 449 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZC3HAV1LQ96H79 300 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 HS6ST2Q96MM7 605 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZNF778Q96MU6 729 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 DOCK7Q96N67 2140 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 BIRC8Q96P09 236 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 KRT12Q99456 494 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 TUBA1CQ9BQE3 449 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 DOHHQ9BU89 302 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 C10orf88Q9H8K7 445 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 LRRC40Q9H9A6 602 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 ZNHIT6Q9NWK9 470 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CLCF1Q9UBD9 225 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 SLC2A6Q9UGQ3 507 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 NENFQ9UMX5 172 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 LIPT1Q9Y234 373 aa4.23□□□□□ -1.73
SCFD1-223ENST00000557076 R3HDM2Q9Y2K5 976 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
SCFD1-223ENST00000557076 CR1P17927 2039 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 FREM3P0C091 2139 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 hCG_1818297A0A087WSY0 165 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 TRBC2A0A5B9 178 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 TP53I11O14683 189 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 NDUFS4O43181 175 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 EMC8O43402 210 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 OR1F1O43749 312 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 TMEM127O75204 238 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 NDUFS7O75251 213 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 GAS8O95995 478 aa4.22□□□□□ -1.73
SCFD1-223ENST00000557076 IFNA16P05015 189 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms