RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ZNF227Q86WZ6 799 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 DEPDC4Q8N2C3 294 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 BPIFB6Q8NFQ5 453 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 OR52B6Q8NGF0 335 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GRPEL2Q8TAA5 225 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 C9orf43Q8TAL5 461 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 M1APQ8TC57 530 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MIB2Q96AX9 1013 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ANKRD9Q96BM1 317 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RCN3Q96D15 328 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MMABQ96EY8 250 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NRBF2Q96F24 287 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SERINC2Q96SA4 455 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF382Q96SR6 550 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 DDX31Q9H8H2 851 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZBTB20Q9HC78 741 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TNFRSF12AQ9NP84 129 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ATP13A2Q9NQ11 1180 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GIMAP4Q9NUV9 329 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 WWOXQ9NZC7 414 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GPN3Q9UHW5 284 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 DAPP1Q9UN19 280 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ASB4Q9Y574 426 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NBPF19A0A087WUL8 3843 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CACNA1BQ00975 2339 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TCRBV3S1A0A5B6 114 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ISPDA4D126 451 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 BLACEA4D250 179 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ARGFXA6NJG6 315 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SUPT3HB4E1H0 165 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PLPP1O14494 284 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SLC22A2O15244 555 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SHOXO15266 292 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MAN1A2O60476 641 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PLIN3O60664 434 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 UGT2B11O75310 529 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CCNKO75909 580 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SEMA3DO95025 777 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PRR35P0CG20 571 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 EPB42P16452 691 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TCN1P20061 433 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ALAS2P22557 587 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PRPH2P23942 346 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ATP5A1P25705 553 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ARRB2P32121 409 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PTGS2P35354 604 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GRK3P35626 688 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CASRP41180 1078 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PIK3CGP48736 1102 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RRADP55042 308 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RAB38P57729 211 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF33BQ06732 778 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RGS1Q08116 209 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SLC13A2Q13183 592 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 COL9A2Q14055 689 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PCLAFQ15004 111 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SLC9B1Q4ZJI4 515 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 XKR6Q5GH73 641 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TOR1AIP1Q5JTV8 583 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 INTS11Q5TA45 600 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MLIPQ5VWP3 458 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 KHDRBS2Q5VWX1 349 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 JMJD6Q6NYC1 403 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MED27Q6P2C8 311 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 FAM122CQ6P4D5 195 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LYPD8Q6UX82 237 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 Q6ZS92 163 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LANCL3Q6ZV70 420 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CPEB2Q7Z5Q1 589 aaKnown RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LGI4Q8N135 537 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 KRT78Q8N1N4 520 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 GALNT16Q8N428 558 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RNF175Q8N4F7 328 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PTGR2Q8N8N7 351 aaPredicted RBP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 APCDD1LQ8NCL9 501 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 FAM156AQ8NDB6 213 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 HUS1BQ8NHY5 278 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.65□□□□□ -1.83
LINC00648-202ENST00000555985 RDH11Q8TC12 318 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 HTRA1Q92743 480 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 FER1L6-AS2Q96M78 137 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LMF1Q96S06 567 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 EGFL8Q99944 293 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TMEM246Q9BRR3 403 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TBCDQ9BTW9 1192 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 LHPPQ9H008 270 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 SLA2Q9H6Q3 261 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 EFCAB1Q9HAE3 211 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 BRF2Q9HAW0 419 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ANKHQ9HCJ1 492 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MMP25Q9NPA2 562 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 NECTIN3Q9NQS3 549 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 OPTCQ9UBM4 332 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 TRPS1Q9UHF7 1281 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 DCDC2Q9UHG0 476 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 C3orf18Q9UK00 162 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ADAM29Q9UKF5 820 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 CES1P1Q9UKY3 287 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 ZNF451Q9Y4E5 1061 aa3.65□□□□□ -1.83
LINC00648-202ENST00000555985 MMACHCQ9Y4U1 282 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms