RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 L3MBTL1Q9Y468 752 aa14.07□□□□□ -0.16
SNX6-205ENST00000555648 DNAJC13O75165 2243 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SERTM1A2A2V5 107 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 EEF1E1-BLOC1S5C9J1V9 151 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 G3V2L1 256 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SYT5O00445 386 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 EEF1E1O43324 174 aaKnown RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 PLOD3O60568 738 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SLITRK5O94991 958 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 CPA3P15088 417 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 CEACAM8P31997 349 aaPredicted RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 OPRM1P35372 400 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 DLX5P56178 289 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 WNT3P56703 355 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 CORO7P57737 925 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SRYQ05066 204 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 ZNHIT3Q15649 155 aaPredicted RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 FBXW10Q5XX13 1052 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 FRMD7Q6ZUT3 714 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 KIF18BQ86Y91 864 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 EIF1ADQ8N9N8 165 aaKnown RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 OR4K17Q8NGC6 315 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SLC35A4Q96G79 324 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SFXN2Q96NB2 322 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 IQCGQ9H095 443 aaKnown RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 SIRT5Q9NXA8 310 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 DNAJB12Q9NXW2 375 aaKnown RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 MRTO4Q9UKD2 239 aaKnown RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 POLR3HQ9Y535 204 aaPredicted RBP14.06□□□□□ -0.16
SNX6-205ENST00000555648 WIF1Q9Y5W5 379 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 CRYBG3Q68DQ2 2970 aa14.06□□□□□ -0.16
SNX6-205ENST00000555648 PLIN3O60664 434 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 RSL1D1O76021 490 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 CHEK2O96017 543 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 PROCP04070 461 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 JUNP05412 331 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 CT45A8P0DMV1 189 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 CT45A9P0DMV2 189 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 UROSP10746 265 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 POU3F2P20265 443 aaPredicted RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 CTSSP25774 331 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 CRHR1P34998 444 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 PTGDSP41222 190 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 CLK3P49761 638 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 PNLIPRP2P54317 469 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 FOXA1P55317 472 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 DNAJB13P59910 316 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 SNTB1Q13884 538 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 CT45A2Q5DJT8 189 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 CHMP1BQ7LBR1 199 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 TRIM42Q8IWZ5 723 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 WDSUB1Q8N9V3 476 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 NAXEQ8NCW5 288 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 OR7G2Q8NG99 324 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 FAM76AQ8TAV0 307 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 ZPLD1Q8TCW7 415 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 MZB1Q8WU39 189 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 VSTM2LQ96N03 204 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 POLDIP3Q9BY77 421 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 OR2B2Q9GZK3 357 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 SDHAF3Q9NRP4 125 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 DDX18Q9NVP1 670 aaKnown RBP14.05□□□□□ -0.16
SNX6-205ENST00000555648 EMCNQ9ULC0 261 aa14.05□□□□□ -0.16
SNX6-205ENST00000555648 SLC28A1O00337 649 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 UBFD1O14562 309 aaKnown RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 RGS14O43566 566 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 SEC22BO75396 215 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 NME6O75414 186 aaPredicted RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 SHBGP04278 402 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 TMIGD3P0DMS9 266 aaPredicted RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 KRT4P19013 534 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 SRD5A2P31213 254 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 SOX18P35713 384 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 ZNF136P52737 540 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 PSMD4P55036 377 aaKnown RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 CEBPEQ15744 281 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 DECR1Q16698 335 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 DCST1Q5T197 706 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 LIPMQ5VYY2 423 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 NOXRED1Q6NXP6 359 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 TMEM107Q6UX40 140 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 IKBIPQ70UQ0 350 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 TRIM46Q7Z4K8 759 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 GOT1L1Q8NHS2 421 aaPredicted RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 FAM222BQ8WU58 562 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 EFHD2Q96C19 240 aaPredicted RBP14.04□□□□□ -0.16
SNX6-205ENST00000555648 TM9SF2Q99805 663 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 ACBD3Q9H3P7 528 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 Q9N2J8 555 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 MYNNQ9NPC7 610 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 PPP4R1LQ9P1A2 415 aa14.04□□□□□ -0.16
SNX6-205ENST00000555648 A0A087WV62 115 aa14.03□□□□□ -0.16
SNX6-205ENST00000555648 TLDC2A0PJX2 215 aa14.03□□□□□ -0.16
SNX6-205ENST00000555648 MBD3L4A6NDZ8 208 aaPredicted RBP14.03□□□□□ -0.16
SNX6-205ENST00000555648 MBD3L3A6NE82 208 aaPredicted RBP14.03□□□□□ -0.16
SNX6-205ENST00000555648 TUBAL3A6NHL2 446 aa14.03□□□□□ -0.16
SNX6-205ENST00000555648 MBD3L5A6NJ08 208 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms