RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 NPSR1Q6W5P4 371 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 CLYBLQ8N0X4 340 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 FAM83FQ8NEG4 500 aaPredicted RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 ABTB1Q969K4 478 aaPredicted RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 TMCO6Q96DC7 493 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 SLC35A4Q96G79 324 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 PRDM14Q9GZV8 571 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 MIEF1Q9NQG6 463 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 TAS2R9Q9NYW1 312 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 EXO1Q9UQ84 846 aaKnown RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 CAMK2AQ9UQM7 478 aa12.6□□□□□ -0.39
PCNX4-209ENST00000555569 WBP11Q9Y2W2 641 aaKnown RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 POLR3HQ9Y535 204 aaPredicted RBP12.6□□□□□ -0.39
PCNX4-209ENST00000555569 ANKHD1Q8IWZ3 2542 aaKnown RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 TLDC2A0PJX2 215 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 KDM4EB2RXH2 506 aaPredicted RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 TSPAN2O60636 221 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 COQ9O75208 318 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 JUNP05412 331 aaKnown RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 IL12BP29460 328 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 NTSP30990 170 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 GCKP35557 465 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 KRT20P35900 424 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 NCBP2P52298 156 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 PSPHP78330 225 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 ZNF155Q12901 538 aaPredicted RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 EFR3AQ14156 821 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 SF3B4Q15427 424 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 DCST1Q5T197 706 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 LACC1Q8IV20 430 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 C10orf107Q8IVU9 208 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 METTL2AQ96IZ6 378 aaKnown RBP12.59□□□□□ -0.39
PCNX4-209ENST00000555569 ADOQ96SZ5 270 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 UGT2B28Q9BY64 529 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 TAS2R7Q9NYW3 318 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 KCNN3Q9UGI6 736 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 CCL27Q9Y4X3 112 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 OTOGQ6ZRI0 2925 aa12.59□□□□□ -0.39
PCNX4-209ENST00000555569 CSMD2Q7Z408 3487 aa12.58□□□□□ -0.39
PCNX4-209ENST00000555569 A0A087WV62 115 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 SLC28A1O00337 649 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 TRIM13O60858 407 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 SEC22BO75396 215 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 CBR3O75828 277 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 SLITRK5O94991 958 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 ACTL6AO96019 429 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 PRPH2P23942 346 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 CEACAM8P31997 349 aaPredicted RBP12.58□□□□□ -0.4
PCNX4-209ENST00000555569 TIMP3P35625 211 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 DLX5P56178 289 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 PCLAFQ15004 111 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 NSUN5P2Q63ZY6 315 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 CLEC6AQ6EIG7 209 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 IKBIPQ70UQ0 350 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 PLCZ1Q86YW0 608 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 RIBC1Q8N443 379 aaPredicted RBP12.58□□□□□ -0.4
PCNX4-209ENST00000555569 WDSUB1Q8N9V3 476 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 OR2W6PQ8NHA6 318 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 DTNBP1Q96EV8 351 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.4
PCNX4-209ENST00000555569 ZNF559Q9BR84 538 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 GATA5Q9BWX5 397 aaPredicted RBP12.58□□□□□ -0.4
PCNX4-209ENST00000555569 OR2B2Q9GZK3 357 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 GLIPR2Q9H4G4 154 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 MKS1Q9NXB0 559 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 C19orf53Q9UNZ5 99 aaPredicted RBP12.58□□□□□ -0.4
PCNX4-209ENST00000555569 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 PTGDR2Q9Y5Y4 395 aa12.58□□□□□ -0.4
PCNX4-209ENST00000555569 MPDZO75970 2070 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 CD8B2A6NJW9 211 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 NPIPB8E9PQR5 432 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 PLOD2O00469 737 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 DVL2O14641 736 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 AZIN1O14977 448 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 RGS14O43566 566 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 IL2RAP01589 272 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 MC3RP41968 323 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 PNLIPRP2P54317 469 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 WNT3P56703 355 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 MRPS22P82650 360 aaKnown RBP12.57□□□□□ -0.4
PCNX4-209ENST00000555569 MYBPHQ13203 477 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 KIAA0040Q15053 153 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 CES4AQ5XG92 561 aa12.57□□□□□ -0.4
PCNX4-209ENST00000555569 TMEM107Q6UX40 140 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms