RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 STARD4Q96DR4 205 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 DNAJA3Q96EY1 480 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 ZMAT2Q96NC0 199 aaKnown RBP2.06□□□□□ -2.08
SNX6-204ENST00000555541 OR4F4Q96R69 305 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 CCSER1Q9C0I3 900 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 NANOGQ9H9S0 305 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 ZCCHC17Q9NP64 241 aaKnown RBP2.06□□□□□ -2.08
SNX6-204ENST00000555541 ERVK-18Q9QC07 812 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 KLHDC2Q9Y2U9 406 aa2.06□□□□□ -2.08
SNX6-204ENST00000555541 CHEK1O14757 476 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 TIMM44O43615 452 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 MMP23AO75900 390 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 HPNP05981 417 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 NPRL3Q12980 569 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 MEDAGQ5VYS4 303 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 OR8H3Q8N146 312 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 DLX4Q92988 240 aaPredicted RBP2.05□□□□□ -2.08
SNX6-204ENST00000555541 SPATA17Q96L03 361 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 GPR137Q96N19 417 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 APOOQ9BUR5 198 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 CARD9Q9H257 536 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 PATZ1Q9HBE1 687 aaKnown RBP2.05□□□□□ -2.08
SNX6-204ENST00000555541 STARD5Q9NSY2 213 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 CNIH4Q9P003 139 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 TRMT6Q9UJA5 497 aaKnown RBP2.05□□□□□ -2.08
SNX6-204ENST00000555541 BARX2Q9UMQ3 279 aaPredicted RBP2.05□□□□□ -2.08
SNX6-204ENST00000555541 MRPS2Q9Y399 296 aaKnown RBP2.05□□□□□ -2.08
SNX6-204ENST00000555541 PTPRUQ92729 1446 aa2.05□□□□□ -2.08
SNX6-204ENST00000555541 TRBV7-9A0A0J9YWB2 115 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 ARPC1BO15143 372 aaKnown RBP2.04□□□□□ -2.08
SNX6-204ENST00000555541 HTATSF1O43719 755 aaKnown RBP2.04□□□□□ -2.08
SNX6-204ENST00000555541 GPX5O75715 221 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CYP11B1P15538 503 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 PTBP1P26599 531 aaKnown RBP eCLIP2.04□□□□□ -2.08
SNX6-204ENST00000555541 ZNF45Q02386 682 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 BCL2L1Q07817 233 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 BNIP1Q12981 228 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CAMK4Q16566 473 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 FUT11Q495W5 492 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 GPAT3Q53EU6 434 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 OR2B11Q5JQS5 317 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 GALNTL5Q7Z4T8 443 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 H1FOOQ8IZA3 346 aaPredicted RBP2.04□□□□□ -2.08
SNX6-204ENST00000555541 SYCP3Q8IZU3 236 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 NAT8LQ8N9F0 302 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CCDC71LQ8N9Z2 235 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 OR4A16Q8NH70 328 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 FBXO30Q8TB52 745 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CFAP36Q96G28 342 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 SLC35E1Q96K37 410 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 IL4I1Q96RQ9 567 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CACNG6Q9BXT2 260 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 ABCB8Q9NUT2 735 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 CRCT1Q9UGL9 99 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 NARFQ9UHQ1 456 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 PURGQ9UJV8 347 aaKnown RBP2.04□□□□□ -2.08
SNX6-204ENST00000555541 LIPT1Q9Y234 373 aa2.04□□□□□ -2.08
SNX6-204ENST00000555541 LTBP1Q14766 1721 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 A0A0J9YVX5 310 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 CACNB4O00305 520 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 SLC28A1O00337 649 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 PSMA7O14818 248 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 CFLARO15519 480 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 ZNF254O75437 659 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 WISP3O95389 354 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 SDC1P18827 310 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 GABRR1P24046 479 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 NF2P35240 595 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 RBMXP38159 391 aaKnown RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 RPL32P62910 135 aaKnown RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 TLE4Q04727 773 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 EIF2B1Q14232 305 aaKnown RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 ELAVL3Q14576 367 aaKnown RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 CLPPQ16740 277 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 METTL11BQ5VVY1 283 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 NKAIN2Q5VXU1 208 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 Q7L0L9 218 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 PRSS42Q7Z5A4 293 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 HSD17B13Q7Z5P4 300 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 RANBP3LQ86VV4 465 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 KIR2DL5BQ8NHK3 375 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 FIBINQ8TAL6 211 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 ADAMTS16Q8TE57 1224 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 C18orf25Q96B23 403 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 NICN1Q9BSH3 213 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 CNPY3Q9BT09 278 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 OR51J1Q9H342 316 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 MEPEQ9NQ76 525 aaPredicted RBP2.03□□□□□ -2.08
SNX6-204ENST00000555541 ELOVL2Q9NXB9 296 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 LHX3Q9UBR4 397 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 ZNF175Q9Y473 711 aa2.03□□□□□ -2.08
SNX6-204ENST00000555541 LRIT2A6NDA9 550 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 SDC3O75056 442 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 LYPLA1O75608 230 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 IGSF6O95976 241 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 SEMG1P04279 462 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 GSTA1P08263 222 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 HIST1H2AGP0C0S8 130 aaPredicted RBP2.02□□□□□ -2.09
SNX6-204ENST00000555541 UROSP10746 265 aa2.02□□□□□ -2.09
SNX6-204ENST00000555541 TOP1P11387 765 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms