RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ITPAQ9BY32 194 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 ACTRT3Q9BYD9 372 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 QRSL1Q9H0R6 528 aaKnown RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 GPN2Q9H9Y4 310 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 FOLH1BQ9HBA9 442 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 FBXO34Q9NWN3 711 aa9.99□□□□□ -0.81
TDP1-211ENST00000555178 HEMK1Q9Y5R4 338 aaPredicted RBP9.99□□□□□ -0.81
TDP1-211ENST00000555178 SPENQ96T58 3664 aaKnown RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 GXYLT2A0PJZ3 443 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 TMEM200CA6NKL6 621 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CREG1O75629 220 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 SERPINA1P01009 418 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MT-ND1P03886 318 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 TFPTP0C1Z6 253 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MMP11P24347 488 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 PCGF2P35227 344 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 TRAP1Q12931 704 aaKnown RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 SPATS1Q496A3 300 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CYP27C1Q4G0S4 372 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 C6orf163Q5TEZ5 329 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CDC73Q6P1J9 531 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 BHLHB9Q6PI77 547 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 ENPP6Q6UWR7 440 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 LGI4Q8N135 537 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MIPOL1Q8TD10 442 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 FAM162AQ96A26 154 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 SLCO4A1Q96BD0 722 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 FBXL20Q96IG2 436 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 IMMP1LQ96LU5 166 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 ZNF578Q96N58 590 aaPredicted RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 TMEM38AQ9H6F2 299 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 ZNF160Q9HCG1 818 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MAGEL2Q9UJ55 1249 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 PTPRQQ9UMZ3 2332 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 SAGE2PA6NJ88 616 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 C1QTNF9BB2RNN3 333 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 C21orf140B9A014 251 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 SLC28A2O43868 658 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MGRN1O60291 552 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 C1QTNF9P0C862 333 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 PRKAR1AP10644 381 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CD82P27701 267 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 RNF144AP50876 292 aaPredicted RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 POLE2P56282 527 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 PSG6Q00889 435 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CHAF1BQ13112 559 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 EXOSC6Q5RKV6 272 aaKnown RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 FCRLBQ6BAA4 426 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 MRGPREQ86SM8 312 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 ADAMTS15Q8TE58 950 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CANT1Q8WVQ1 401 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 METTL21AQ8WXB1 218 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 LRGUKQ96M69 825 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 NSMCE2Q96MF7 247 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 RAD21L1Q9H4I0 556 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 A4GALTQ9NPC4 353 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 NKX1-2Q9UD57 310 aaPredicted RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 FBXL4Q9UKA2 621 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 NXT1Q9UKK6 140 aaKnown RBP9.98□□□□□ -0.81
TDP1-211ENST00000555178 AP3M1Q9Y2T2 418 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 PCDHGA6Q9Y5G7 932 aa9.98□□□□□ -0.81
TDP1-211ENST00000555178 CPAMD8Q8IZJ3 1885 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 CENPVL1A0A0U1RR11 272 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 TCRBV3S1A0A5B6 114 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 A8MVJ9 347 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 TMEM229AB2RXF0 380 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 H3BNX3 289 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 TAF4O00268 1085 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 FCMRO60667 390 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 PRAMEF2O60811 474 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 SLITRK5O94991 958 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 C8BP07358 591 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 NR2F1P10589 423 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 GABRA3P34903 492 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 EIF2S3P41091 472 aaKnown RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 MAP3K8P41279 467 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 RFX3P48380 749 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 SLC26A5P58743 744 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 SSPNQ14714 243 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 MYBPC3Q14896 1274 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ERICH5Q6P6B1 374 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 FIGNL1Q6PIW4 674 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 RNF111Q6ZNA4 994 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 VTCN1Q7Z7D3 282 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ZAR1Q86SH2 424 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 OR14A16Q8NHC5 309 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 FGF11Q92914 225 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 TAMM41Q96BW9 452 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ZG16BQ96DA0 208 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 RSRC1Q96IZ7 334 aaKnown RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 GAL3ST4Q96RP7 486 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 SEPHS2Q99611 448 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 TREX2Q9BQ50 279 aaPredicted RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 PELOQ9BRX2 385 aaKnown RBP9.97□□□□□ -0.81
TDP1-211ENST00000555178 GPR87Q9BY21 358 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ZNF700Q9H0M5 742 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 P4HTMQ9NXG6 502 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 P2RX2Q9UBL9 471 aa9.97□□□□□ -0.81
TDP1-211ENST00000555178 ITPR1Q14643 2758 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms