RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CLECL1Q8IZS7 167 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 SLC38A9Q8NBW4 561 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CHDHQ8NE62 594 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 OR13F1Q8NGS4 319 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 OR5K2Q8NHB8 316 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 C16orf78Q8WTQ4 265 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 GEMIN6Q8WXD5 167 aaKnown RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 TFGQ92734 400 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ZDHHC12Q96GR4 267 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 FERD3LQ96RJ6 166 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 MBOAT4Q96T53 435 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 PITX2Q99697 317 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 SLC35A5Q9BS91 424 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 NLNQ9BYT8 704 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 KRT84Q9NSB2 600 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 SLC6A13Q9NSD5 602 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 TAS2R9Q9NYW1 312 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 CIDEBQ9UHD4 219 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 RARRES3Q9UL19 164 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ICKQ9UPZ9 632 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 NAALAD2Q9Y3Q0 740 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 PCDHGB3Q9Y5G1 929 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 HEBP2Q9Y5Z4 205 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 COLEC10Q9Y6Z7 277 aa10.42□□□□□ -0.74
SHMT2-216ENST00000554975 ZNF469Q96JG9 3925 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 FBN3Q75N90 2809 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 TMEM247A6NEH6 219 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ARRDC5A6NEK1 342 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 GABRR3A8MPY1 467 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 MYO1GB0I1T2 1018 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 H3BSA7 217 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 MASP2O00187 686 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 SLC1A7O00341 560 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 GUCY1B2O75343 617 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 UQCRC2P22695 453 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 NDUFS1P28331 727 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 SHMT2P34897 504 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 CHI3L1P36222 383 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ARL4DP49703 201 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 IL5RAQ01344 420 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 C2orf80Q0P641 193 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 GAB1Q13480 694 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ATP1A4Q13733 1029 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 HEPACAMQ14CZ8 416 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 TESK1Q15569 626 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ZIK1Q3SY52 487 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 CCSMST1Q4G0I0 132 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 KDM4DQ6B0I6 523 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ANGPTL8Q6UXH0 198 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 FBLIM1Q8WUP2 373 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 IPCEF1Q8WWN9 437 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 RASSF5Q8WWW0 418 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 FCGR1BQ92637 280 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 MR1Q95460 341 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 SLC41A2Q96JW4 573 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 DOHHQ9BU89 302 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 MS4A8Q9BY19 250 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 EPS8L2Q9H6S3 715 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 ZBTB20Q9HC78 741 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-216ENST00000554975 PDE7BQ9NP56 450 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 HRASLS2Q9NWW9 162 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 OSGIN2Q9Y236 505 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 B3GNT3Q9Y2A9 372 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 CSAG2Q9Y5P2 127 aa10.41□□□□□ -0.74
SHMT2-216ENST00000554975 NUP214P35658 2090 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-216ENST00000554975 HEATR5BQ9P2D3 2071 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 A0A1W2PRB8 838 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 OR6C74A6NCV1 312 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 M0QX08 132 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 PDPK1O15530 556 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 SEC14L2O76054 403 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ETHE1O95571 254 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 CLIC3O95833 236 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ANGPTL1O95841 491 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ARAFP10398 606 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ANXA8P13928 327 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 SOAT1P35610 550 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 GRK3P35626 688 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 PRIM2P49643 509 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ABATP80404 500 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 CD47Q08722 323 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 SCARB2Q14108 478 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 TMEM35AQ53FP2 167 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 CATSPEREQ5SY80 951 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 KHDRBS2Q5VWX1 349 aaKnown RBP10.4□□□□□ -0.74
SHMT2-216ENST00000554975 FAHD1Q6P587 224 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 LINC00299Q6ZSB3 139 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 OOSP2Q86WS3 158 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 DEPDC4Q8N2C3 294 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ST6GALNAC3Q8NDV1 305 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 ABHD11Q8NFV4 315 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 OR4E2Q8NGC2 313 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 LCN9Q8WX39 176 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 OR5P2Q8WZ92 322 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 C12orf43Q96C57 262 aaKnown RBP10.4□□□□□ -0.74
SHMT2-216ENST00000554975 PSD2Q9BQI7 771 aa10.4□□□□□ -0.74
SHMT2-216ENST00000554975 FAIM2Q9BWQ8 316 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms