RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ACOT12Q8WYK0 555 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 CNOT9Q92600 299 aaKnown RBP14.77□□□□□ -0.05
SYNE3-203ENST00000554873 OR4K3Q96R72 315 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 CACNG6Q9BXT2 260 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 ISYNA1Q9NPH2 558 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 SLC9A8Q9Y2E8 581 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 FRMPD3Q5JV73 1810 aa14.77□□□□□ -0.05
SYNE3-203ENST00000554873 SEPT4O43236 478 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 LRRTM2O43300 516 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 EEF1E1O43324 174 aaKnown RBP14.76□□□□□ -0.05
SYNE3-203ENST00000554873 SMAD6O43541 496 aaKnown RBP14.76□□□□□ -0.05
SYNE3-203ENST00000554873 PRPH2P23942 346 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 GIFP27352 417 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 ACSL1P33121 698 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 SLC11A1P49279 550 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 MFSD14CQ5VZR4 134 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 FCRLBQ6BAA4 426 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 NXPE1Q8N323 547 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 UPF1Q92900 1129 aaKnown RBP eCLIP14.76□□□□□ -0.05
SYNE3-203ENST00000554873 YIPF4Q9BSR8 244 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 ABCG4Q9H172 646 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 NDOR1Q9UHB4 597 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 OR51B4Q9Y5P0 310 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 PRKYO43930 277 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 RP2O75695 350 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 CPSF4O95639 269 aaKnown RBP14.76□□□□□ -0.05
SYNE3-203ENST00000554873 GASTP01350 101 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 NUDT7P0C024 238 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 OR1E2P47887 323 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 LIMS1P48059 325 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 SFRP5Q5T4F7 317 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 METTL11BQ5VVY1 283 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 LYPLAL1Q5VWZ2 237 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 SEZ6L2Q6UXD5 910 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 TMEM173Q86WV6 379 aaPredicted RBP14.76□□□□□ -0.05
SYNE3-203ENST00000554873 OR52I1Q8NGK6 324 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 C12orf66Q96MD2 445 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 THSD1Q9NS62 852 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 ACER3Q9NUN7 267 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 OR6C2Q9NZP2 312 aa14.76□□□□□ -0.05
SYNE3-203ENST00000554873 YY2O15391 372 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 GAAP10253 952 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 NFYAP23511 347 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ATP5A1P25705 553 aaKnown RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 CCR7P32248 378 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 PCGF2P35227 344 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 RFC3P40938 356 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 SRP9P49458 86 aaKnown RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 HMGA2P52926 109 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 AP1S1P61966 158 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 MC2RQ01718 297 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 HLXQ14774 488 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 MICBQ29980 383 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 LYPD4Q6UWN0 246 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 CLECL1Q8IZS7 167 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF687Q8N1G0 1237 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 C12orf45Q8N5I9 185 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 BMPERQ8N8U9 685 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF527Q8NB42 609 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 WFDC5Q8TCV5 224 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ACTR6Q9GZN1 396 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 SAP130Q9H0E3 1048 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 FN3KQ9H479 309 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 DSPPQ9NZW4 1301 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 RAB19A4D1S5 217 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 C2orf78A6NCI8 922 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ARRDC5A6NEK1 342 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 PRPS1L1P21108 318 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 ITGB8P26012 769 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 BOP1Q14137 746 aaKnown RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 OCLNQ16625 522 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 GGTA1PQ4G0N0 100 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 VASNQ6EMK4 673 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 UNC5DQ6UXZ4 953 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 UBE2R2Q712K3 238 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 BTN2A1Q7KYR7 527 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 TSPAN33Q86UF1 283 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 LRRC28Q86X40 367 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 OR8J1Q8NGP2 316 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 OR5M3Q8NGP4 307 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 MRPL48Q96GC5 212 aaKnown RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 KLF16Q9BXK1 252 aaPredicted RBP14.75□□□□□ -0.05
SYNE3-203ENST00000554873 RNF32Q9H0A6 362 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 OSGEPL1Q9H4B0 414 aa14.75□□□□□ -0.05
SYNE3-203ENST00000554873 MCRIP1C9JLW8 97 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SLC28A2O43868 658 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 TFP02787 698 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 S100A9P06702 114 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 FEN1P39748 380 aaKnown RBP14.74□□□□□ -0.05
SYNE3-203ENST00000554873 RFX3P48380 749 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 PITPNBP48739 271 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DGKEP52429 567 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CRHR2Q13324 411 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 SLC36A2Q495M3 483 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 CASP12Q6UXS9 341 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 ZNF783Q6ZMS7 281 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 L3MBTL4Q8NA19 623 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 GPR26Q8NDV2 337 aa14.74□□□□□ -0.05
SYNE3-203ENST00000554873 DBF4BQ8NFT6 615 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms